Microbiome differential abundance methods produce different results across 38 datasets JT Nearing, GM Douglas, MG Hayes, J MacDonald, DK Desai, N Allward, ... Nature communications 13 (1), 342, 2022 | 464 | 2022 |
Denoising the Denoisers: an independent evaluation of microbiome sequence error-correction approaches JT Nearing, GM Douglas, AM Comeau, MGI Langille PeerJ 6, e5364, 2018 | 331* | 2018 |
Identifying biases and their potential solutions in human microbiome studies JT Nearing, AM Comeau, MGI Langille Microbiome 9 (1), 113, 2021 | 132 | 2021 |
Harnessing the plant microbiome to promote the growth of agricultural crops J Zhang, J Cook, JT Nearing, J Zhang, R Raudonis, BR Glick, ... Microbiological Research 245, 126690, 2021 | 130 | 2021 |
Infectious complications are associated with alterations in the gut microbiome in pediatric patients with acute lymphoblastic leukemia JT Nearing, J Connors, S Whitehouse, J Van Limbergen, T Macdonald, ... Frontiers in cellular and infection microbiology 9, 28, 2019 | 59 | 2019 |
Assessing the variation within the oral microbiome of healthy adults JT Nearing, V DeClercq, J Van Limbergen, MGI Langille mSphere, 2020 | 49 | 2020 |
Metagenomic functional shifts to plant induced environmental changes SN Yurgel, JT Nearing, GM Douglas, MGI Langille Frontiers in microbiology 10, 1682, 2019 | 42 | 2019 |
Plant-based diets and cancer risk: what is the evidence? V DeClercq, JT Nearing, E Sweeney Current nutrition reports 11 (2), 354-369, 2022 | 21 | 2022 |
Investigation of the impact of commonly used medications on the oral microbiome of individuals living without major chronic conditions V DeClercq, JT Nearing, MGI Langille PLoS One 16 (12), e0261032, 2021 | 11 | 2021 |
Implications of taxonomic bias for microbial differential-abundance analysis MR McLaren, JT Nearing, AD Willis, KG Lloyd, BJ Callahan bioRxiv, 2022.08. 19.504330, 2022 | 9 | 2022 |
Investigating the gut microbial community and genes in children with differing levels of change in serum asparaginase activity during pegaspargase treatment for acute … KA Dunn, J Connors, JP Bielawski, JT Nearing, MGI Langille, ... Leukemia & lymphoma 62 (4), 927-936, 2021 | 7 | 2021 |
Investigating the oral microbiome in retrospective and prospective cases of prostate, colon, and breast cancer JT Nearing, V DeClercq, MGI Langille npj Biofilms and Microbiomes 9 (1), 23, 2023 | 6 | 2023 |
An in vivo genome‐wide shRNA screen identifies BCL6 as a targetable biomarker of paclitaxel resistance in breast cancer M Sultan, JT Nearing, JM Brown, TT Huynh, BM Cruickshank, ... Molecular Oncology 15 (8), 2046-2064, 2021 | 6 | 2021 |
The effect of oral iron supplementation on gut microbial composition: a secondary analysis of a double-blind, randomized controlled trial among Cambodian women of reproductive age E Finlayson-Trick, J Nearing, JAJ Fischer, Y Ma, S Wang, H Krouen, ... Microbiology Spectrum 11 (3), e05273-22, 2023 | 3 | 2023 |
Oral microbial signatures associated with age and frailty in Canadian adults V DeClercq, RJ Wright, JT Nearing, MGI Langille Scientific Reports 14 (1), 9685, 2024 | 1 | 2024 |
IDENTIFCATION OF ROBUST BIOMARKERS USING MICROBIOME DNA SEQUENCING WITH A FOCUS ON THE ORAL MICROBIOME AND CANCER ASSOCIATIONS JT Nearing | | 2022 |