Highly conserved s2m element of SARS-CoV-2 dimerizes via a kissing complex and interacts with host miRNA-1307-3p JA Imperatore, CL Cunningham, KA Pellegrene, RG Brinson, JP Marino, ... Nucleic acids research 50 (2), 1017-1032, 2022 | 32 | 2022 |
Bioinformatics Analysis of the s2m Mutations within the SARS-CoV-2 Omicron Lineages. CJ Frye, M Shine, JA Makowski, AH Kensinger, CL Cunningham, ... Journal of Medical Virology, 2022 | 9 | 2022 |
Structural, Dynamical, and Entropic Differences between SARS-CoV and SARS-CoV-2 s2m Elements Using Molecular Dynamics Simulations AH Kensinger, JA Makowski, KA Pellegrene, JA Imperatore, ... ACS Physical Chemistry Au 3 (1), 30-43, 2022 | 6 | 2022 |
Effect of the SARS-CoV-2 Delta-associated G15U mutation on the s2m element dimerization and its interactions with miR-1307-3p CL Cunningham, CJ Frye, JA Makowski, AH Kensinger, M Shine, ... RNA 29 (11), 1754-1771, 2023 | 3 | 2023 |
Conserved Elements in the 3'-UTR of SARS-CoV-2: Involvement in Genomic Dimerization and Interactions with Cellular Micrornas JA Imperatore, CL Cunningham, CJ Frye, KA Pellegrene, JD Evanseck, ... Biophysical Journal 120 (3), 313a, 2021 | 3 | 2021 |
Delta SARS-CoV-2 s2m structure, dynamics, and entropy: consequences of the G15U mutation JA Makowski, AH Kensinger, CL Cunningham, CJ Frye, M Shine, ... ACS Physical Chemistry Au 3 (5), 434-443, 2023 | 2 | 2023 |
Biophysical characterization of the G-quadruplex and i-motif in the 5′-untranslated region of the DNMT3a gene D Brown, CL Cunningham, MR Mihailescu Biophysical Journal 123 (3), 496a, 2024 | 1 | 2024 |
Host microRNA interactions with the SARS-CoV-2 viral genome 3’-untranslated region CJ Frye, CL Cunningham, MR Mihailescu bioRxiv, 2023 | 1 | 2023 |
Characterization of the SARS-CoV-2 Genome 3′-Untranslated Region Interactions with Host MicroRNAs CJ Frye, CL Cunningham, MR Mihailescu ACS Omega, 2024 | | 2024 |
Host microRNA interactions with the SARS-COV-2 viral genome 3′-untranslated region CJ Frye, C Cunningham, MR Mihailescu Biophysical Journal 123 (3), 84a, 2024 | | 2024 |
Protein-RNA interactions of FMRP and CCND1: Implications of regulation in neurogenesis R Palumbo, C Cunningham, CJ Frye, MR Mihailescu Biophysical Journal 122 (3), 217a, 2023 | | 2023 |
Structural and thermodynamic consequences of the G31U and U5C mutations in the SARS-CoV-2 s2m AH Kensinger, JA Makowski, KA Pellegrene, CL Cunningham, CJ Frye, ... Biophysical Journal 122 (3), 359a-360a, 2023 | | 2023 |
Delta variant versus ancestral SARS-CoV-2 s2m dynamics and relative entropy JA Makowski, AH Kensinger, KA Pellegrene, C Cunningham, CJ Frye, ... Biophysical Journal 122 (3), 358a, 2023 | | 2023 |
Viral-host RNA-RNA interactions in SARS-CoV-2: Study of miR-34a-5p binding interactions within the genome 3'-untranslated region CJ Frye, C Cunningham, AH Kensinger, JA Makowski, JD Evanseck, ... Biophysical Journal 122 (3), 359a, 2023 | | 2023 |
Characterization of a G-quadruplex structure at the 3’end of NEAT1_2 and its role in regulating its stability CL Cunningham, EM Benner, MR Mihailescu Biophysical Journal 122 (3), 361a, 2023 | | 2023 |
Inside Front Cover Image, Volume 95, Number 1, January 2023 CJ Frye, M Shine, JA Makowski, AH Kensinger, CL Cunningham, ... Journal of Medical Virology 95 (1), e28467, 2023 | | 2023 |
Micro rna interactions as therapeutic targets for covid-19 and other viral infections MR Mihailescu, JD Evanseck, JA Imperatore, KAM Guarinoni, ... US Patent App. 17/451,521, 2022 | | 2022 |
G quadruplex structures in NEAT1: potential functions in regulating its stability and its interactions with the fused in sarcoma protein MR Mihailescu, EM Benner, C Cunningham, C Grey, E Milback Biophysical Journal 121 (3), 166a, 2022 | | 2022 |
Viral-host RNA-RNA interactions in SARS-CoV-2: study of MIR-760-3p interactions with the genome 3'-untranslated region CJ Frye, CL Cunningham, KA Pellegrene, AH Kensinger, JA Makowski, ... Biophysical Journal 121 (3), 207a, 2022 | | 2022 |
Structural and dynamical impact of the two-nucleotide difference in sequence between SARS-CoV and SARS-CoV-2 s2m using molecular dynamics AH Kensinger, KA Pellegrene, JA Makowski, CL Cunningham, CJ Frye, ... Biophysical Journal 121 (3), 207a, 2022 | | 2022 |