Conservation of complex knotting and slipknotting patterns in proteins JI Sulkowska, EJ Rawdon, KC Millet, JN Onuchic, A Stasiak Biophysical Journal 102 (3), 253a, 2012 | 264 | 2012 |
Genomics-aided structure prediction JI Sułkowska, F Morcos, M Weigt, T Hwa, JN Onuchic Proceedings of the National Academy of Sciences 109 (26), 10340-10345, 2012 | 252 | 2012 |
KnotProt: a database of proteins with knots and slipknots M Jamroz, W Niemyska, EJ Rawdon, A Stasiak, KC Millett, P Sułkowski, ... Nucleic acids research 43 (D1), D306-D314, 2015 | 210 | 2015 |
A Stevedore's protein knot D Bölinger, JI Sułkowska, HP Hsu, LA Mirny, M Kardar, JN Onuchic, ... PLoS computational biology 6 (4), e1000731, 2010 | 186 | 2010 |
Dodging the crisis of folding proteins with knots JI Sulkowska, P Sulkowski, J Onuchic Biophysical Journal 96 (3), 81a, 2009 | 182 | 2009 |
Mechanical stretching of proteins—a theoretical survey of the Protein Data Bank JI Sułkowska, M Cieplak Journal of Physics: Condensed Matter 19 (28), 283201, 2007 | 151 | 2007 |
Stabilizing effect of knots on proteins JI Sułkowska, P Sułkowski, P Szymczak, M Cieplak Proceedings of the National Academy of Sciences 105 (50), 19714-19719, 2008 | 148 | 2008 |
On the remarkable mechanostability of scaffoldins and the mechanical clamp motif A Valbuena, J Oroz, R Hervas, AM Vera, D Rodriguez, M Menendez, ... Proceedings of the National Academy of Sciences 106 (33), 13791-13796, 2009 | 142 | 2009 |
Selection of optimal variants of Gō-like models of proteins through studies of stretching JI Sułkowska, M Cieplak Biophysical journal 95 (7), 3174-3191, 2008 | 129 | 2008 |
Topological knots and links in proteins P Dabrowski-Tumanski, JI Sulkowska Proceedings of the National Academy of Sciences 114 (13), 3415-3420, 2017 | 124 | 2017 |
Slipknotting upon native-like loop formation in a trefoil knot protein JK Noel, JI Sułkowska, JN Onuchic Proceedings of the National Academy of Sciences 107 (35), 15403-15408, 2010 | 124 | 2010 |
Mechanical strength of 17 134 model proteins and cysteine slipknots M Sikora, JI Sułkowska, M Cieplak PLoS computational biology 5 (10), e1000547, 2009 | 120 | 2009 |
A guide to targeting the endocannabinoid system in drug design A Stasiulewicz, K Znajdek, M Grudzień, T Pawiński, JI Sulkowska International journal of molecular sciences 21 (8), 2778, 2020 | 110 | 2020 |
Energy landscape of knotted protein folding JI Sułkowska, JK Noel, JN Onuchic Proceedings of the National Academy of Sciences 109 (44), 17783-17788, 2012 | 110 | 2012 |
Correlated fluctuations of microparticles in viscoelastic solutions: Quantitative measurement of material properties by microrheology in the presence of optical traps M Atakhorrami, JI Sulkowska, KM Addas, GH Koenderink, JX Tang, ... Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 73 (6 …, 2006 | 97 | 2006 |
KnotProt 2.0: a database of proteins with knots and other entangled structures P Dabrowski-Tumanski, P Rubach, D Goundaroulis, J Dorier, P Sułkowski, ... Nucleic acids research 47 (D1), D367-D375, 2019 | 95 | 2019 |
Tightening of knots in proteins JI Sułkowska, P Sułkowski, P Szymczak, M Cieplak Physical review letters 100 (5), 058106, 2008 | 94 | 2008 |
Identifying knots in proteins KC Millett, EJ Rawdon, A Stasiak, JI Sułkowska Biochemical Society Transactions 41 (2), 533-537, 2013 | 92 | 2013 |
Methyl transfer by substrate signaling from a knotted protein fold T Christian, R Sakaguchi, AP Perlinska, G Lahoud, T Ito, EA Taylor, ... Nature structural & molecular biology 23 (10), 941-948, 2016 | 83 | 2016 |
Complex lasso: new entangled motifs in proteins W Niemyska, P Dabrowski-Tumanski, M Kadlof, E Haglund, P Sułkowski, ... Scientific reports 6 (1), 36895, 2016 | 79 | 2016 |