CLIP and complementary methods M Hafner, M Katsantoni, T Köster, J Marks, J Mukherjee, D Staiger, J Ule, ... Nature Reviews Methods Primers 1 (1), 1-23, 2021 | 238 | 2021 |
An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana C Streitner, T Köster, CG Simpson, P Shaw, S Danisman, JWS Brown, ... Nucleic acids research 40 (22), 11240-11255, 2012 | 150 | 2012 |
Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7 K Meyer, T Köster, C Nolte, C Weinholdt, M Lewinski, I Grosse, D Staiger Genome biology 18, 1-22, 2017 | 107 | 2017 |
Marking RNA: m6A writers, readers, and functions in Arabidopsis M Reichel, T Köster, D Staiger Journal of molecular cell biology 11 (10), 899-910, 2019 | 91 | 2019 |
Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in Arabidopsis T Koester, K Meyer, C Weinholdt, LM Smith, M Lummer, C Speth, I Grosse, ... Nucleic acids research 42 (15), 9925-9936, 2014 | 87 | 2014 |
Pre-mRNA Splicing in Plants: In Vivo Functions of RNA-Binding Proteins Implicated in the Splicing Process K Meyer, T Koester, D Staiger Biomolecules 5 (3), 1717-1740, 2015 | 80 | 2015 |
RNA-binding proteins revisited–the emerging Arabidopsis mRNA interactome T Köster, C Marondedze, K Meyer, D Staiger Trends in Plant Science 22 (6), 512-526, 2017 | 74 | 2017 |
Spotlight on post-transcriptional control in the circadian system D Staiger, T Köster Cellular and Molecular Life Sciences 68, 71-83, 2011 | 72 | 2011 |
A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis R Zhang, R Kuo, M Coulter, CPG Calixto, JC Entizne, W Guo, Y Marquez, ... Genome biology 23 (1), 149, 2022 | 54 | 2022 |
Principles of mRNA targeting via the Arabidopsis m6A-binding protein ECT2 L Arribas-Hernández, S Rennie, T Köster, C Porcelli, M Lewinski, ... Elife 10, e72375, 2021 | 51 | 2021 |
A global view of RNA-protein interactions identifies post-transcriptional regulators of root hair cell fate SW Foley, SJ Gosai, D Wang, N Selamoglu, AC Sollitti, T Köster, A Steffen, ... Developmental Cell 41 (2), 204-220. e5, 2017 | 49 | 2017 |
Salicylic acid‐dependent and‐independent impact of an RNA‐binding protein on plant immunity C Hackmann, C Korneli, M Kutyniok, T Köster, M Wiedenlübbert, ... Plant, cell & environment 37 (3), 696-706, 2014 | 43 | 2014 |
RNA-binding protein immunoprecipitation from whole-cell extracts T Köster, D Staiger Arabidopsis Protocols, 679-695, 2014 | 41 | 2014 |
Plant ribonomics: proteins in search of RNA partners T Köster, K Meyer Trends in plant science 23 (4), 352-365, 2018 | 22 | 2018 |
On the move through time–a historical review of plant clock research M Johansson, T Köster Plant Biology 21, 13-20, 2019 | 20 | 2019 |
CLIP and RNA interactome studies to unravel genome-wide RNA-protein interactions in vivo in Arabidopsis thaliana T Köster, M Reichel, D Staiger Methods 178, 63-71, 2020 | 17 | 2020 |
The RIPper case: identification of RNA-binding protein targets by RNA immunoprecipitation T Köster, M Haas, D Staiger Plant Circadian Networks: Methods and Protocols, 107-121, 2014 | 15 | 2014 |
SEQing: web-based visualization of iCLIP and RNA-seq data in an interactive python framework M Lewinski, Y Bramkamp, T Köster, D Staiger BMC bioinformatics 21, 1-6, 2020 | 11 | 2020 |
Plant individual nucleotide resolution cross-linking and immunoprecipitation to characterize RNA-protein complexes T Köster, D Staiger RNA Tagging: Methods and Protocols, 255-267, 2020 | 6 | 2020 |
Identification of Pri-miRNA stem-loop interacting proteins in plants using a modified version of the Csy4 CRISPR endonuclease J Lüders, AR Winkel, M Reichel, VW Bitterer, M Scheibe, C Widmann, ... International Journal of Molecular Sciences 23 (16), 8961, 2022 | 4 | 2022 |