Protein synthesis rates and ribosome occupancies reveal determinants of translation elongation rates A Riba, N Di Nanni, N Mittal, E Arhné, A Schmidt, M Zavolan Proceedings of the National Academy of Sciences, 201817299, 2019 | 189 | 2019 |
Hybridization of powdery mildew strains gives rise to pathogens on novel agricultural crop species F Menardo, CR Praz, S Wyder, R Ben-David, S Bourras, H Matsumae, ... Nature Genetics 48, 201-205, 2016 | 180 | 2016 |
Temporal specificity and heterogeneity of Drosophila immune cells PB Cattenoz, R Sakr, A Pavlidaki, C Delaporte, A Riba, N Molina, ... EMBO Journal, 2020 | 107 | 2020 |
Interplay of microRNA and epigenetic regulation in the human regulatory network M Osella, A Riba, A Testori, D Corà, M Caselle Frontiers in genetics 5, 345, 2014 | 62 | 2014 |
A rare codon-based translational program of cell proliferation JC Guimaraes, N Mittal, A Gnann, D Jedlinski, A Riba, K Buczak, ... Genome biology 21, 1-20, 2020 | 58 | 2020 |
A combination of transcriptional and microRNA regulation improves the stability of the relative concentrations of target genes A Riba, C Bosia, M El Baroudi, L Ollino, M Caselle PLoS computational biology 10 (2), e1003490, 2014 | 53 | 2014 |
Cell cycle gene regulation dynamics revealed by RNA velocity and deep-learning A Riba, A Oravecz, M Durik, S Jiménez, V Alunni, M Cerciat, M Jung, ... Nature communications 13 (1), 2865, 2022 | 45 | 2022 |
Terminal exon characterization with TECtool reveals an abundance of cell-specific isoforms AJ Gruber, F Gypas, A Riba, R Schmidt, M Zavolan Nature methods 15 (10), 832-836, 2018 | 31 | 2018 |
Explicit Modeling of siRNA-Dependent On- and Off-Target Repression Improves the Interpretation of Screening Results A Riba, M Emmenlauer, A Chen, F Sigoillot, F Cong, C Dehio, J Jenkins, ... Cell Systems 4, 1-12, 2017 | 25 | 2017 |
Regulation of transcription reactivation dynamics exiting mitosis S Sarnataro, A Riba, N Molina PLoS Computational Biology 17 (10), e1009354, 2021 | 8 | 2021 |
A model-driven quantitative analysis of retrotransposon distributions in the human genome A Riba, MR Fumagalli, M Caselle, M Osella Genome Biology and Evolution 12 (11), 2045-2059, 2020 | 2 | 2020 |
Biophysical analysis of miRNA-dependent gene regulation A Riba, M Osella, M Caselle, M Zavolan Systems Biology, 257-273, 2018 | 1 | 2018 |
Unraveling the oscillatory dynamics of mRNA metabolism and chromatin accessibility during the cell cycle through integration of single-cell multiomic data MK Nariya, D Santiago-Algarra, O Tassy, M Cerciat, T Ye, A Riba, ... bioRxiv, 2024.01. 11.575159, 2024 | | 2024 |