A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium Z Su, PP Łabaj, S Li, J Thierry-Mieg, D Thierry-Mieg, W Shi, C Wang, ... Nature biotechnology 32 (9), 903, 2014 | 849 | 2014 |
The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance C Wang, B Gong, PR Bushel, J Thierry-Mieg, D Thierry-Mieg, J Xu, ... Nature biotechnology 32 (9), 926-932, 2014 | 529 | 2014 |
Detecting and correcting systematic variation in large-scale RNA sequencing data S Li, PP Łabaj, P Zumbo, P Sykacek, W Shi, L Shi, J Phan, PY Wu, ... Nature biotechnology 32 (9), 888-895, 2014 | 368 | 2014 |
A global metagenomic map of urban microbiomes and antimicrobial resistance D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ... Cell 184 (13), 3376-3393. e17, 2021 | 253* | 2021 |
Characterization and improvement of RNA-Seq precision in quantitative transcript expression profiling PP Łabaj, GG Leparc, BE Linggi, LM Markillie, HS Wiley, DP Kreil Bioinformatics 27 (13), i383-i391, 2011 | 182 | 2011 |
Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment KR Chng, C Li, D Bertrand, AHQ Ng, JS Kwah, HM Low, C Tong, ... Nature medicine 26 (6), 941-951, 2020 | 171 | 2020 |
Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures SA Munro, SP Lund, PS Pine, H Binder, DA Clevert, A Conesa, J Dopazo, ... Nature Communications 5, 2014 | 127 | 2014 |
The Metagenomics and Metadesign of the Subways and Urban Biomes (MetaSUB) International Consortium inaugural meeting report MetaSUB International Consortium Microbiome 4 (1), 1-14, 2016 | 123 | 2016 |
The SARS-CoV-2 ORF10 is not essential in vitro or in vivo in humans K Pancer, A Milewska, K Owczarek, A Dabrowska, M Kowalski, P Łabaj, ... PLoS pathogens 16 (12), e1008959, 2020 | 93 | 2020 |
Experiences with workflows for automating data-intensive bioinformatics O Spjuth, E Bongcam-Rudloff, GC Hernández, L Forer, M Giovacchini, ... Biology direct 10 (1), 1-12, 2015 | 86 | 2015 |
Altered cytokine levels and immune responses in patients with SARS-CoV-2 infection and related conditions R Noroozi, W Branicki, K Pyrc, PP Łabaj, E Pospiech, M Taheri, ... Cytokine 133, 155143, 2020 | 73 | 2020 |
COVID-19 drug practices risk antimicrobial resistance evolution E Afshinnekoo, C Bhattacharya, A Burguete-García, E Castro-Nallar, ... The Lancet Microbe, 2021 | 68 | 2021 |
Angiotensin converting enzyme: A review on expression profile and its association with human disorders with special focus on SARS-CoV-2 infection S Ghafouri-Fard, R Noroozi, MD Omrani, W Branicki, E Pośpiech, A Sayad, ... Vascular Pharmacology, 2020 | 67 | 2020 |
Replication of severe acute respiratory syndrome coronavirus 2 in human respiratory epithelium A Milewska, A Kula-Pacurar, J Wadas, A Suder, A Szczepanski, ... Journal of virology 94 (15), 2020 | 66 | 2020 |
Effects of host genetic variations on response to, susceptibility and severity of respiratory infections S Ghafouri-Fard, R Noroozi, R Vafaee, W Branicki, E Poṡpiech, K Pyrc, ... Biomedicine & Pharmacotherapy 128, 110296, 2020 | 53 | 2020 |
The maternal ECG suppression algorithm for efficient extraction of the fetal ECG from abdominal signal A Matonia, J Jezewski, K Horoba, A Gacek, P Labaj Engineering in Medicine and Biology Society, 2006. EMBS'06. 28th Annual …, 2006 | 51 | 2006 |
Some practical remarks on neural networks approach to fetal cardiotocograms classification M Jezewski, J Wrobel, P Labaj, J Leski, N Henzel, K Horoba, J Jezewski 2007 29th Annual International Conference of the IEEE Engineering in …, 2007 | 42 | 2007 |
Sensitivity, specificity, and reproducibility of RNA-Seq differential expression calls PP Łabaj, DP Kreil Biology direct 11 (1), 1-12, 2016 | 36 | 2016 |
Microarray profiling of preselected CHO host cell subclones identifies gene expression patterns associated with in‐creased production capacity E Harreither, M Hackl, J Pichler, S Shridhar, N Auer, PP Łabaj, ... Biotechnology journal 10 (10), 1625-1638, 2015 | 33 | 2015 |
A verified genomic reference sample for assessing performance of cancer panels detecting small variants of low allele frequency W Jones, B Gong, N Novoradovskaya, D Li, R Kusko, TA Richmond, ... Genome Biology 22 (1), 1-38, 2021 | 32 | 2021 |