| Updates to the integrated protein–protein interaction benchmarks: docking benchmark version 5 and affinity benchmark version 2 T Vreven, IH Moal, A Vangone, BG Pierce, PL Kastritis, M Torchala, ... Journal of molecular biology 427 (19), 3031-3041, 2015 | 447 | 2015 |
| SwarmDock: a server for flexible protein–protein docking M Torchala, IH Moal, RAG Chaleil, J Fernandez-Recio, PA Bates Bioinformatics 29 (6), 807-809, 2013 | 315 | 2013 |
| Butyrophilin-2A1 directly binds germline-encoded regions of the Vγ9Vδ2 TCR and is essential for phosphoantigen sensing MM Karunakaran, CR Willcox, M Salim, D Paletta, AS Fichtner, A Noll, ... Immunity 52 (3), 487-498. e6, 2020 | 221 | 2020 |
| The γδTCR combines innate immunity with adaptive immunity by utilizing spatially distinct regions for agonist selection and antigen responsiveness PVACH Daisy Melandri, Iva Zlatareva, Raphaël A. G. Chaleil, Robin J. Dart ... Nature Immunology, 2018 | 218 | 2018 |
| Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ... Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016 | 168 | 2016 |
| Blind prediction of homo‐and hetero‐protein complexes: The CASP13‐CAPRI experiment MF Lensink, G Brysbaert, N Nadzirin, S Velankar, RAG Chaleil, T Gerguri, ... Proteins: Structure, Function, and Bioinformatics 87 (12), 1200-1221, 2019 | 121 | 2019 |
| Application of abductive ILP to learning metabolic network inhibition from temporal data A Tamaddoni-Nezhad, R Chaleil, A Kakas, S Muggleton Machine Learning 64, 209-230, 2006 | 114 | 2006 |
| Evolution of enzymes in metabolism: a network perspective R Alves, RAG Chaleil, MJE Sternberg Journal of Molecular Biology 320 (4), 751-770, 2002 | 107 | 2002 |
| A simple biophysical model emulates budding yeast chromosome condensation TMK Cheng, S Heeger, RAG Chaleil, N Matthews, A Stewart, J Wright, ... Elife 4, e05565, 2015 | 104 | 2015 |
| Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment MF Lensink, G Brysbaert, T Mauri, N Nadzirin, S Velankar, RAG Chaleil, ... Proteins: Structure, Function, and Bioinformatics 89 (12), 1800-1823, 2021 | 95 | 2021 |
| Implicit flexibility in protein docking: cross‐docking and local refinement M Król, RAG Chaleil, AL Tournier, PA Bates Proteins: Structure, Function, and Bioinformatics 69 (4), 750-757, 2007 | 85 | 2007 |
| A Markov‐chain model description of binding funnels to enhance the ranking of docked solutions M Torchala, IH Moal, RAG Chaleil, R Agius, PA Bates Proteins: Structure, Function, and Bioinformatics 81 (12), 2143-2149, 2013 | 38 | 2013 |
| Flexible protein-protein docking with SwarmDock IH Moal, RAG Chaleil, PA Bates Protein Complex Assembly: Methods and Protocols, 413-428, 2018 | 24 | 2018 |
| A machine learning approach for ranking clusters of docked protein‐protein complexes by pairwise cluster comparison E Pfeiffenberger, RAG Chaleil, IH Moal, PA Bates Proteins: Structure, Function, and Bioinformatics 85 (3), 528-543, 2017 | 22 | 2017 |
| Modeling the effects of toxins in metabolic networks A Tamaddoni-Nezhad, R Chaleil, AC Kakas, M Sternberg, J Nicholson, ... IEEE Engineering in Medicine and Biology Magazine 26 (2), 37, 2007 | 18 | 2007 |
| Enhanced sampling of protein conformational states for dynamic cross‐docking within the protein‐protein docking server SwarmDock M Torchala, T Gerguri, RAG Chaleil, P Gordon, F Russell, M Keshani, ... Proteins: Structure, Function, and Bioinformatics 88 (8), 962-972, 2020 | 17 | 2020 |
| Abduction and induction for learning models of inhibition in metabolic networks A Tamaddoni-Nezhad, R Chaleil, A Kakas, S Muggleton Fourth International Conference on Machine Learning and Applications (ICMLA …, 2005 | 11 | 2005 |
| Interplay of adherens junctions and matrix proteolysis determines the invasive pattern and growth of squamous cell carcinoma T Kato, RP Jenkins, S Derzsi, M Tozluoglu, A Rullan, S Hooper, ... Elife 12, e76520, 2023 | 5 | 2023 |
| Two-stage Bayesian networks for metabolic network prediction JW Bang, R Chaleil, J Williamson Proceedings of the Workshop on Qualitative and Model-Based Reasoning in …, 2003 | 5 | 2003 |
| The role of bivalent ions in the regulation of D-loop extension mediated by DMC1 during meiotic recombination V Altmannova, M Spirek, L Orlic, A Jēkabsons, T Clarence, A Henggeler, ... Iscience 25 (11), 2022 | 2 | 2022 |
Paul A BatesThe Francis Crick Institute在 crick.ac.uk 的电子邮件经过验证
