Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley D Bulgarelli, R Garrido-Oter, PC Münch, A Weiman, J Dröge, Y Pan, ... Cell host & microbe 17 (3), 392-403, 2015 | 1285 | 2015 |
Producing polished prokaryotic pangenomes with the Panaroo pipeline G Tonkin-Hill, N MacAlasdair, C Ruis, A Weimann, G Horesh, JA Lees, ... Genome biology 21, 1-21, 2020 | 541 | 2020 |
Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi S Hacquard, B Kracher, K Hiruma, PC Münch, R Garrido-Oter, MR Thon, ... Nature communications 7 (1), 11362, 2016 | 265 | 2016 |
Predicting antimicrobial resistance in Pseudomonas aeruginosa with machine learning‐enabled molecular diagnostics A Khaledi, A Weimann, M Schniederjans, E Asgari, TH Kuo, A Oliver, ... EMBO molecular medicine 12 (3), e10264, 2020 | 152 | 2020 |
Stepwise pathogenic evolution of Mycobacterium abscessus JM Bryant, KP Brown, S Burbaud, I Everall, JM Belardinelli, ... Science 372 (6541), eabb8699, 2021 | 115 | 2021 |
From genomes to phenotypes: Traitar, the microbial trait analyzer A Weimann, K Mooren, J Frank, PB Pope, A Bremges, AC McHardy MSystems 1 (6), 10.1128/msystems. 00101-16, 2016 | 106 | 2016 |
Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes I Maus, A Bremges, Y Stolze, S Hahnke, KG Cibis, DE Koeck, YS Kim, ... Biotechnology for biofuels 10, 1-22, 2017 | 46 | 2017 |
Seqenv: linking sequences to environments through text mining L Sinclair, UZ Ijaz, LJ Jensen, MJL Coolen, C Gubry-Rangin, ... PeerJ 4, e2690, 2016 | 32 | 2016 |
Metagenomics and CAZyme discovery BJ Kunath, A Bremges, A Weimann, AC McHardy, PB Pope Protein-carbohydrate interactions: methods and protocols, 255-277, 2017 | 28 | 2017 |
De novo prediction of the genomic components and capabilities for microbial plant biomass degradation from (meta-) genomes A Weimann, Y Trukhina, PB Pope, SGA Konietzny, AC McHardy Biotechnology for biofuels 6, 1-13, 2013 | 24 | 2013 |
Mycobacterium abscessus pathogenesis identified by phenogenomic analyses L Boeck, S Burbaud, M Skwark, WH Pearson, J Sangen, AW Wuest, ... Nature Microbiology 7 (9), 1431-1441, 2022 | 22 | 2022 |
Inference of phenotype-defining functional modules of protein families for microbial plant biomass degraders SGA Konietzny, PB Pope, A Weimann, AC McHardy Biotechnology for biofuels 7, 1-22, 2014 | 15 | 2014 |
Protein antibiotics: mind your language A Correia, A Weimann Nature Reviews Microbiology 19 (1), 7-7, 2021 | 6 | 2021 |
Mutational spectra analysis reveals bacterial niche and transmission routes C Ruis, A Weimann, G Tonkin-Hill, AP Pandurangan, M Matuszewska, ... bioRxiv, 2022.07. 13.499881, 2022 | 5 | 2022 |
Mutational spectra are associated with bacterial niche C Ruis, A Weimann, G Tonkin-Hill, AP Pandurangan, M Matuszewska, ... Nature Communications 14 (1), 7091, 2023 | 2 | 2023 |
Impact of transient acquired hypermutability on the inter- and intra-species competitiveness of Pseudomonas aeruginosa YY On, W Figueroa, C Fan, PM Ho, ÉB Bényei, A Weimann, C Ruis, ... The ISME Journal 17 (11), 1931-1939, 2023 | 2 | 2023 |
Phagosomal RNA sensing through TLR8 controls susceptibility to tuberculosis C Maserumule, C Passemar, OSH Oh, K Hegyi, K Brown, A Weimann, ... bioRxiv, 2022.06. 14.496072, 2022 | 1 | 2022 |
Evolution and host-specific adaptation of Pseudomonas aeruginosa A Weimann, AM Dinan, C Ruis, A Bernut, S Pont, K Brown, J Ryan, ... Science 385 (6704), eadi0908, 2024 | | 2024 |
Sequence-based modelling of bacterial genomes enables accurate antibiotic resistance prediction M Wiatrak, A Weimann, AM Dinan, M Brbić, RA Floto bioRxiv, 2024.01. 03.574022, 2024 | | 2024 |
From genotype to phenotype: inferring relationships between microbial traits and genomic components A Weimann Heinrich-Heine-Universität Düsseldorf, 2016 | | 2016 |