Global SUMOylation on active chromatin is an acute heat stress response restricting transcription EA Niskanen, M Malinen, P Sutinen, S Toropainen, V Paakinaho, ... Genome biology 16, 1-19, 2015 | 107 | 2015 |
Trapping of 27 bp–8 kbp DNA and immobilization of thiol-modified DNA using dielectrophoresis S Tuukkanen, A Kuzyk, JJ Toppari, H Häkkinen, VP Hytönen, E Niskanen, ... Nanotechnology 18 (29), 295204, 2007 | 102 | 2007 |
Stress-induced nuclear condensation of NELF drives transcriptional downregulation P Rawat, M Boehning, B Hummel, F Aprile-Garcia, AS Pandit, ... Molecular cell 81 (5), 1013-1026. e11, 2021 | 98 | 2021 |
Crosstalk between androgen and pro-inflammatory signaling remodels androgen receptor and NF-κB cistrome to reprogram the prostate cancer cell transcriptome M Malinen, EA Niskanen, MU Kaikkonen, JJ Palvimo Nucleic acids research 45 (2), 619-630, 2017 | 69 | 2017 |
Introduction of histidine residues into avidin subunit interfaces allows pH-dependent regulation of quaternary structure and biotin binding HR Nordlund, VP Hytönen, OH Laitinen, STH Uotila, EA Niskanen, ... FEBS letters 555 (3), 449-454, 2003 | 69 | 2003 |
Agonist-specific protein interactomes of glucocorticoid and androgen receptor as revealed by proximity mapping JK Lempiäinen, EA Niskanen, KM Vuoti, RE Lampinen, H Göös, ... Molecular & Cellular Proteomics 16 (8), 1462-1474, 2017 | 68 | 2017 |
Design and construction of highly stable, protease-resistant chimeric avidins VP Hytönen, JAE Määttä, TKM Nyholm, O Livnah, ... Journal of Biological Chemistry 280 (11), 10228-10233, 2005 | 68 | 2005 |
Generation of lentivirus vectors using recombinant baculoviruses HP Lesch, S Turpeinen, EA Niskanen, AJ Mähönen, KJ Airenne, ... Gene therapy 15 (18), 1280-1286, 2008 | 64 | 2008 |
Effect of ATP binding and hydrolysis on dynamics of canine parvovirus NS1 EA Niskanen, TO Ihalainen, O Kalliolinna, MM Hakkinen, ... Journal of virology 84 (10), 5391-5403, 2010 | 46 | 2010 |
Parvovirus induced alterations in nuclear architecture and dynamics TO Ihalainen, EA Niskanen, J Jylhävä, O Paloheimo, N Dross, ... PloS one 4 (6), e5948, 2009 | 46 | 2009 |
Baculovirus‐mediated immediate‐early gene expression and nuclear reorganization in human cells JP Laakkonen, MU Kaikkonen, PHA Ronkainen, TO Ihalainen, ... Cellular microbiology 10 (3), 667-681, 2008 | 45 | 2008 |
Isolated hevein-like domains, but not 31-kd endochitinases, are responsible for IgE-mediated in vitro and in vivo reactions in latex-fruit syndrome P Karisola, A Kotovuori, S Poikonen, E Niskanen, N Kalkkinen, ... Journal of Allergy and Clinical Immunology 115 (3), 598-605, 2005 | 44 | 2005 |
Chromatin SUMOylation in heat stress: To protect, pause and organise? SUMO stress response on chromatin EA Niskanen, JJ Palvimo BioEssays 39 (6), 1600263, 2017 | 38 | 2017 |
Global analysis of transcription in castration-resistant prostate cancer cells uncovers active enhancers and direct androgen receptor targets S Toropainen, EA Niskanen, M Malinen, P Sutinen, MU Kaikkonen, ... Scientific reports 6 (1), 33510, 2016 | 34 | 2016 |
Coxsackievirus B3-induced cellular protrusions: structural characteristics and functional competence O Paloheimo, TO Ihalainen, S Tauriainen, O Välilehto, S Kirjavainen, ... Journal of virology 85 (13), 6714-6724, 2011 | 33 | 2011 |
Mutations in DNA binding and transactivation domains affect the dynamics of parvovirus NS1 protein EA Niskanen, O Kalliolinna, TO Ihalainen, M Häkkinen, M Vihinen-Ranta Journal of virology 87 (21), 11762-11774, 2013 | 31 | 2013 |
Dynamics and interactions of parvoviral NS1 protein in the nucleus TO Ihalainen, EA Niskanen, J Jylhävä, T Turpeinen, J Rinne, J Timonen, ... Cellular microbiology 9 (8), 1946-1959, 2007 | 31 | 2007 |
Structure and characterization of a novel chicken biotin-binding protein A (BBP-A) VP Hytönen, JAE Määttä, EA Niskanen, J Huuskonen, KJ Helttunen, ... BMC Structural Biology 7, 1-20, 2007 | 29 | 2007 |
SUMOylation regulates the protein network and chromatin accessibility at glucocorticoid receptor-binding sites V Paakinaho, JK Lempiäinen, G Sigismondo, EA Niskanen, M Malinen, ... Nucleic acids research 49 (4), 1951-1971, 2021 | 27 | 2021 |
Chicken genome analysis reveals novel genes encoding biotin-binding proteins related to avidin family EA Niskanen, VP Hytönen, A Grapputo, HR Nordlund, MS Kulomaa, ... BMC genomics 6, 1-13, 2005 | 27 | 2005 |