A comprehensive analysis of cytokine-induced and nuclear factor-κB-dependent genes in primary rat pancreatic β-cells AK Cardozo, H Heimberg, Y Heremans, R Leeman, B Kutlu, M Kruhøffer, ... Journal of Biological Chemistry 276 (52), 48879-48886, 2001 | 415 | 2001 |
Discovery of gene networks regulating cytokine-induced dysfunction and apoptosis in insulin-producing INS-1 cells B Kutlu, AK Cardozo, MI Darville, M Kruhøffer, N Magnusson, T Ørntoft, ... Diabetes 52 (11), 2701-2719, 2003 | 276 | 2003 |
Global profiling of coxsackievirus-and cytokine-induced gene expression in human pancreatic islets P Ylipaasto, B Kutlu, S Rasilainen, J Rasschaert, K Salmela, H Teerijoki, ... Diabetologia 48 (8), 1510-1522, 2005 | 157 | 2005 |
Detailed transcriptome atlas of the pancreatic beta cell B Kutlu, D Burdick, D Baxter, J Rasschaert, D Flamez, DL Eizirik, N Welsh, ... BMC medical genomics 2 (1), 3, 2009 | 156 | 2009 |
Molecular regulation of monocyte chemoattractant protein-1 expression in pancreatic β-cells B Kutlu, MI Darville, AK Cardozo, DL Eizirik Diabetes 52 (2), 348-355, 2003 | 118 | 2003 |
RCytoscape: tools for exploratory network analysis PT Shannon, M Grimes, B Kutlu, JJ Bot, DJ Galas BMC bioinformatics 14, 1-9, 2013 | 112 | 2013 |
Cytokine-mediated induction of anti-apoptotic genes that are linked to nuclear factor kappa-B (NF-κB) signalling in human islets and in a mouse beta cell line SA Sarkar, B Kutlu, K Velmurugan, S Kizaka-Kondoh, CE Lee, R Wong, ... Diabetologia 52, 1092-1101, 2009 | 111 | 2009 |
T1DBase: integration and presentation of complex data for type 1 diabetes research EM Hulbert, LJ Smink, EC Adlem, JE Allen, DB Burdick, OS Burren, ... Nucleic acids research 35 (suppl 1), D742-D746, 2007 | 94 | 2007 |
Global profiling of double stranded RNA-and IFN-γ-induced genes in rat pancreatic beta cells J Rasschaert, D Liu, B Kutlu, AK Cardozo, M Kruhøffer, TF Ørntoft, ... Diabetologia 46 (12), 1641-1657, 2003 | 91 | 2003 |
Limited capacity of human adult islets expanded in vitro to redifferentiate into insulin-producing β-cells AG Kayali, LE Flores, AD Lopez, B Kutlu, E Baetge, R Kitamura, E Hao, ... Diabetes 56 (3), 703-708, 2007 | 88 | 2007 |
Use of microarray analysis to unveil transcription factor and gene networks contributing to β cell dysfunction and apoptosis DL EIZIRIK, B KUTLU, J RASSCHAERT, M DARVILLE, AK CARDOZO Annals of the New York Academy of Sciences 1005 (1), 55-74, 2003 | 73 | 2003 |
High-resolution gene expression profiling using RNA sequencing in patients with inflammatory bowel disease and in mouse models of colitis K Holgersen, B Kutlu, B Fox, K Serikawa, J Lord, AK Hansen, TL Holm Journal of Crohn's and Colitis 9 (6), 492-506, 2015 | 68 | 2015 |
Temporal profiling of cytokine-induced genes in pancreatic β-cells by meta-analysis and network inference M Lopes, B Kutlu, M Miani, CH Bang-Berthelsen, J Størling, F Pociot, ... Genomics 103 (4), 264-275, 2014 | 59 | 2014 |
Evolutionary etiology of high-grade astrocytomas Y Song, Q Zhang, B Kutlu, S Difilippantonio, R Bash, D Gilbert, C Yin, ... Proceedings of the National Academy of Sciences 110 (44), 17933-17938, 2013 | 51 | 2013 |
A genomic-based approach identifies FXYD domain containing ion transport regulator 2 (FXYD2) γa as a pancreatic beta cell-specific biomarker D Flamez, I Roland, A Berton, B Kutlu, D Dufrane, MC Beckers, ... Diabetologia 53, 1372-1383, 2010 | 46 | 2010 |
Transcriptomic analysis links diverse hypothalamic cell types to fibroblast growth factor 1-induced sustained diabetes remission MA Bentsen, DM Rausch, Z Mirzadeh, K Muta, JM Scarlett, JM Brown, ... Nature communications 11 (1), 4458, 2020 | 39 | 2020 |
Optimal scaling of digital transcriptomes G Glusman, J Caballero, M Robinson, B Kutlu, L Hood PloS one 8 (11), e77885, 2013 | 35 | 2013 |
Meta-analysis of gene expression in human pancreatic islets after in vitro expansion B Kutlu, AG Kayali, S Jung, G Parnaud, D Baxter, G Glusman, N Goodman, ... Physiological genomics 39 (1), 72-81, 2009 | 25 | 2009 |
New Approaches for in Silico Identification of Cytokine‐Modified β Cell Gene Networks B KUTLU, N NAAMANE, L BERTHOU, DL EIZIRIK Annals of the New York Academy of Sciences 1037 (1), 41-58, 2004 | 15 | 2004 |
Whole transcriptome analysis and validation of metabolic pathways in subcutaneous adipose tissues during FGF21-induced weight loss in non-human primates SA Murray, LS Dalbøge, K Baquero, CA Sanford, A Misquith, AJ Mercer, ... Scientific reports 10 (1), 7287, 2020 | 9 | 2020 |