Analyses of allele-specific gene expression in highly divergent mouse crosses identifies pervasive allelic imbalance JJ Crowley, V Zhabotynsky, W Sun, S Huang, IK Pakatci, Y Kim, JR Wang, ... Nature genetics 47 (4), 353-360, 2015 | 221 | 2015 |
FMLRC: Hybrid long read error correction using an FM-index JR Wang, J Holt, L McMillan, CD Jones BMC bioinformatics 19 (1), 50, 2018 | 137 | 2018 |
R2d2 Drives Selfish Sweeps in the House Mouse JP Didion, AP Morgan, L Yadgary, TA Bell, RC McMullan, ... Molecular biology and evolution 33 (6), 1381-1395, 2016 | 52 | 2016 |
Merging of multi-string BWTs with applications J Holt, L McMillan Bioinformatics 30 (24), 3524-3531, 2014 | 52 | 2014 |
Unmanned aerial system collision avoidance using artificial potential fields J Ruchti, R Senkbeil, J Carroll, J Dickinson, J Holt, S Biaz Journal of Aerospace Information Systems 11 (3), 140-144, 2014 | 50 | 2014 |
Long-read genome sequencing for the molecular diagnosis of neurodevelopmental disorders SM Hiatt, JMJ Lawlor, LH Handley, RC Ramaker, BB Rogers, ... Human Genetics and Genomics Advances, 100023, 2021 | 47 | 2021 |
Kilquist Syndrome: A Novel Syndromic Hearing Loss Disorder Caused by Homozygous Deletion of SLC12A2 EF Macnamara, AE Koehler, P D’Souza, T Estwick, P Lee, G Vezina, ... Human mutation, 2019 | 42 | 2019 |
A novel multi-alignment pipeline for high-throughput sequencing data S Huang, J Holt, CY Kao, L McMillan, W Wang Database 2014, bau057, 2014 | 42 | 2014 |
The landscape of reported VUS in multi-gene panel and genomic testing: Time for a change HL Rehm, JT Alaimo, S Aradhya, P Bayrak-Toydemir, H Best, R Brandon, ... Genetics in Medicine 25 (12), 100947, 2023 | 35 | 2023 |
Collision avoidance techniques for unmanned aerial vehicles B Gardiner, W Ahmad, T Cooper, M Haveard, J Holt, S Biaz Auburn University 8 (07), 2011 | 34 | 2011 |
Genome sequencing for early-onset or atypical dementia: high diagnostic yield and frequent observation of multiple contributory alleles JN Cochran, EC McKinley, M Cochran, MD Amaral, BA Moyers, ... Molecular Case Studies 5 (6), a003491, 2019 | 33 | 2019 |
Constructing Burrows-Wheeler transforms of large string collections via merging J Holt, L McMillan Proceedings of the 5th ACM Conference on Bioinformatics, Computational …, 2014 | 20 | 2014 |
The evolutionary fates of a large segmental duplication in mouse AP Morgan, JM Holt, RC McMullan, TA Bell, AMF Clayshulte, JP Didion, ... Genetics 204 (1), 267-285, 2016 | 18 | 2016 |
The many evolutionary fates of a large segmental duplication in mouse AP Morgan, JM Holt, RC McMullan, TA Bell, AMF Clayshulte, JP Didion, ... bioRxiv, 043687, 2016 | 18* | 2016 |
Comparison of unmanned aerial system collision avoidance algorithms in a simulated environment J Holt, S Biaz, CA Aji Journal of Guidance, Control, and Dynamics 36 (3), 881-883, 2013 | 18 | 2013 |
Polishing de novo nanopore assemblies of bacteria and eukaryotes with FMLRC2 QXC Mak, RR Wick, JM Holt, JR Wang Molecular Biology and Evolution 40 (3), msad048, 2023 | 17 | 2023 |
Read annotation pipeline for high-throughput sequencing data J Holt, S Huang, L McMillan, W Wang Proceedings of the International Conference on Bioinformatics, Computational …, 2013 | 17 | 2013 |
VarSight: prioritizing clinically reported variants with binary classification algorithms JM Holt, B Wilk, CL Birch, DM Brown, M Gajapathy, AC Moss, ... BMC Bioinformatics 20, 1-10, 2019 | 16 | 2019 |
UAV collision avoidance using artificial potential fields J Ruchti, R Senkbeil, J Carroll, J Dickinson, J Holt, S Biaz Computer Science and Software Engineering Department, Auburn University …, 2011 | 16 | 2011 |
Applying whole-genome sequencing in relation to phenotype and outcomes in siblings with cystic fibrosis MA Wilk, AT Braun, PM Farrell, A Laxova, DM Brown, JM Holt, CL Birch, ... Molecular Case Studies 6 (1), a004531, 2020 | 15 | 2020 |