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Umesh Kalathiya
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The emerging landscape of single-molecule protein sequencing technologies
JA Alfaro, P Bohländer, M Dai, M Filius, CJ Howard, XF Van Kooten, ...
Nature methods 18 (6), 604-617, 2021
2682021
Highly conserved homotrimer cavity formed by the SARS-CoV-2 spike glycoprotein: a novel binding site
U Kalathiya, M Padariya, M Mayordomo, M Lisowska, J Nicholson, ...
Journal of clinical medicine 9 (5), 1473, 2020
872020
Nonsense-mediated mRNA decay: pathologies and the potential for novel therapeutics
K Pawlicka, U Kalathiya, J Alfaro
Cancers 12 (3), 765, 2020
412020
Functional interfaces, biological pathways, and regulations of interferon-related DNA damage resistance signature (IRDS) genes
M Padariya, A Sznarkowska, S Kote, M Gómez-Herranz, S Mikac, M Pilch, ...
Biomolecules 11 (5), 622, 2021
272021
Structural, functional, and stability change predictions in human telomerase upon specific point mutations
U Kalathiya, M Padariya, M Baginski
Scientific Reports 9 (1), 8707, 2019
272019
Multivalent display of SARS-CoV-2 spike (RBD domain) of COVID-19 to nanomaterial, protein ferritin nanocages
U Kalathiya, M Padariya, R Fahraeus, S Chakraborti, TR Hupp
Biomolecules 11 (2), 297, 2021
262021
Structure-based design and evaluation of novel N-phenyl-1H-indol-2-amine derivatives for fat mass and obesity-associated (FTO) protein inhibition
M Padariya, U Kalathiya
Computational Biology and Chemistry 64, 414-425, 2016
252016
Insights into the effects of cancer associated mutations at the UPF2 and ATP-binding sites of NMD master regulator: UPF1
U Kalathiya, M Padariya, K Pawlicka, CS Verma, D Houston, TR Hupp, ...
International journal of molecular sciences 20 (22), 5644, 2019
172019
The elephant evolved p53 isoforms that escape MDM2-mediated repression and cancer
M Padariya, ML Jooste, T Hupp, R Fåhraeus, B Vojtesek, F Vollrath, ...
Molecular biology and evolution 39 (7), msac149, 2022
152022
Structural and dynamic changes adopted by EmrE, multidrug transporter protein—Studies by molecular dynamics simulation
M Padariya, U Kalathiya, M Baginski
Biochimica et Biophysica Acta (BBA)-Biomembranes 1848 (10), 2065-2074, 2015
152015
Recognition dynamics of cancer mutations on the ERp57-tapasin interface
M Padariya, U Kalathiya, DR Houston, JA Alfaro
Cancers 12 (3), 737, 2020
132020
Drug repositioning against COVID-19: a first line treatment
N Bibi, A Farid, S Gul, J Ali, F Amin, U Kalathiya, T Hupp
Journal of Biomolecular Structure and Dynamics 40 (23), 12812-12826, 2022
112022
Viruses, cancer and non-self recognition
M Padariya, U Kalathiya, S Mikac, K Dziubek, MC Tovar Fernandez, ...
Open biology 11 (3), 200348, 2021
112021
Interfaces with structure dynamics of the workhorses from cells revealed through cross-linking mass spectrometry (CLMS)
U Kalathiya, M Padariya, J Faktor, E Coyaud, JA Alfaro, R Fahraeus, ...
Biomolecules 11 (3), 382, 2021
112021
Structural and dynamic insights on the EmrE protein with TPP+ and related substrates through molecular dynamics simulations
M Padariya, U Kalathiya, M Baginski
Chemistry and physics of lipids 212, 1-11, 2018
112018
Molecular modeling and evaluation of novel dibenzopyrrole derivatives as telomerase inhibitors and potential drug for cancer therapy
U Kalathiya, M Padariya, B Maciej
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB), 2014
112014
Molecular basis and quantitative assessment of TRF1 and TRF2 protein interactions with TIN2 and Apollo peptides
U Kalathiya, M Padariya, M Baginski
European Biophysics Journal 46, 171-187, 2017
102017
Identification of 1H‐indene‐(1,3,5,6)‐tetrol derivatives as potent pancreatic lipase inhibitors using molecular docking and molecular dynamics approach
U Kalathiya, M Padariya, M Baginski
Biotechnology and applied biochemistry 63 (6), 765-778, 2016
102016
Molecular determinants and specificity of mRNA with alternatively-Spliced UPF1 isoforms, influenced by an insertion in the ‘regulatory loop’
M Padariya, R Fahraeus, T Hupp, U Kalathiya
International Journal of Molecular Sciences 22 (23), 12744, 2021
92021
Docking simulations, Molecular properties and ADMET studies of novel Chromane6, 7 diol analogues as potential inhibitors of Mushroom tyrosinase
M Padariya, U Kalathiya, M Baginski
Gene Therapy and Molecular Biology 16, 201-217, 2014
92014
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