关注
Shipei Xing
Shipei Xing
Postdoc, UC San Diego
在 health.ucsd.edu 的电子邮件经过验证 - 首页
标题
引用次数
引用次数
年份
Risk-based chemical ranking and generating a prioritized human exposome database
F Zhao, L Li, Y Chen, Y Huang, TP Keerthisinghe, A Chow, T Dong, S Jia, ...
Environmental health perspectives 129 (4), 047014, 2021
472021
DaDIA: Hybridizing data-dependent and data-independent acquisition modes for generating high-quality metabolomic data
J Guo, S Shen, S Xing, T Huan
Analytical Chemistry 93 (4), 2669-2677, 2021
422021
Open access repository-scale propagated nearest neighbor suspect spectral library for untargeted metabolomics
W Bittremieux, NE Avalon, SP Thomas, SA Kakhkhorov, AA Aksenov, ...
Nature communications 14 (1), 8488, 2023
412023
Retrieving and utilizing hypothetical neutral losses from tandem mass spectra for spectral similarity analysis and unknown metabolite annotation
S Xing, Y Hu, Z Yin, M Liu, X Tang, M Fang, T Huan
Analytical Chemistry 92 (21), 14476-14483, 2020
412020
ISFrag: de novo recognition of in-Source fragments for liquid chromatography–mass spectrometry data
J Guo, S Shen, S Xing, H Yu, T Huan
Analytical Chemistry 93 (29), 10243-10250, 2021
332021
EVA: evaluation of metabolic feature fidelity using a deep learning model trained with over 25000 extracted ion chromatograms
J Guo, S Shen, S Xing, Y Chen, F Chen, EM Porter, H Yu, T Huan
Analytical Chemistry 93 (36), 12181-12186, 2021
292021
Fold-change compression: an unexplored but correctable quantitative bias caused by nonlinear electrospray ionization responses in untargeted metabolomics
H Yu, S Xing, L Nierves, PF Lange, T Huan
Analytical chemistry 92 (10), 7011-7019, 2020
292020
BUDDY: molecular formula discovery via bottom-up MS/MS interrogation
S Xing, S Shen, B Xu, X Li, T Huan
Nature Methods, 1-10, 2023
27*2023
Addressing big data challenges in mass spectrometry-based metabolomics
J Guo, H Yu, S Xing, T Huan
Chemical Communications 58 (72), 9979-9990, 2022
272022
The underappreciated diversity of bile acid modifications
I Mohanty, H Mannochio-Russo, JV Schweer, Y El Abiead, W Bittremieux, ...
Cell 187 (7), 1801-1818. e20, 2024
262024
Global-scale metabolomic profiling of human hair for simultaneous monitoring of endogenous metabolome, short-and long-term exposome
Y Chen, J Guo, S Xing, H Yu, T Huan
Frontiers in Chemistry 9, 674265, 2021
262021
SIMILE enables alignment of tandem mass spectra with statistical significance
DGC Treen, M Wang, S Xing, KB Louie, T Huan, PC Dorrestein, ...
Nature communications 13 (1), 2510, 2022
252022
No Endospore Formation Confirmed in Members of the Phylum Proteobacteria
P Beskrovnaya, D Fakih, I Morneau, A Hashimi, D Guadarrama Bello, ...
Applied and Environmental Microbiology 87 (5), e02312-20, 2021
232021
Paired microbiome and metabolome analyses associate bile acid changes with colorectal cancer progression
T Fu, T Huan, G Rahman, H Zhi, Z Xu, TG Oh, J Guo, S Coulter, A Tripathi, ...
Cell reports 42 (8), 2023
202023
SteroidXtract: deep learning-based pattern recognition enables comprehensive and rapid extraction of steroid-like metabolic features for automated biology-driven metabolomics
S Xing, Y Jiao, M Salehzadeh, KK Soma, T Huan
Analytical Chemistry 93 (14), 5735-5743, 2021
172021
Recognizing contamination fragment ions in liquid chromatography–Tandem mass spectrometry data
S Xing, H Yu, M Liu, Q Jia, Z Sun, M Fang, T Huan
Journal of the American Society for Mass Spectrometry 32 (9), 2296-2305, 2021
172021
Radical fragment ions in collision-induced dissociation-based tandem mass spectrometry
S Xing, T Huan
Analytica Chimica Acta 1200, 339613, 2022
152022
HExpPredict: In Vivo Exposure Prediction of Human Blood Exposome Using a Random Forest Model and Its Application in Chemical Risk Prioritization
F Zhao, L Li, P Lin, Y Chen, S Xing, H Du, Z Wang, J Yang, T Huan, ...
Environmental Health Perspectives 131 (3), 037009, 2023
132023
JPA: joint metabolic feature extraction increases the depth of chemical coverage for LC-MS-Based metabolomics and exposomics
J Guo, S Shen, M Liu, C Wang, B Low, Y Chen, Y Hu, S Xing, H Yu, Y Gao, ...
Metabolites 12 (3), 212, 2022
92022
HDPairFinder: A data processing platform for hydrogen/deuterium isotopic labeling-based nontargeted analysis of trace-level amino-containing chemicals in environmental water
T Zhao, K Carroll, CB Craven, NJP Wawryk, S Xing, J Guo, XF Li, T Huan
Journal of Environmental Sciences 136, 583-593, 2024
52024
系统目前无法执行此操作,请稍后再试。
文章 1–20