Electrostatics and diffusion of molecules in solution: simulations with the University of Houston Brownian Dynamics program JD Madura, JM Briggs, RC Wade, ME Davis, BA Luty, A Ilin, J Antosiewicz, ... Computer Physics Communications 91 (1-3), 57-95, 1995 | 767 | 1995 |
New hydrogen-bond potentials for use in determining energetically favorable binding sites on molecules of known structure DNA Boobbyer, PJ Goodford, PM McWhinnie, RC Wade Journal of medicinal chemistry 32 (5), 1083-1094, 1989 | 470 | 1989 |
The ins and outs of cytochrome P450s V Cojocaru, PJ Winn, RC Wade Biochimica et Biophysica Acta (BBA)-General Subjects 1770 (3), 390-401, 2007 | 399 | 2007 |
How do substrates enter and products exit the buried active site of cytochrome P450cam? 1. Random expulsion molecular dynamics investigation of ligand access channels and … SK Lüdemann, V Lounnas, RC Wade Journal of molecular biology 303 (5), 797-811, 2000 | 390 | 2000 |
Crucial HSP70 co-chaperone complex unlocks metazoan protein disaggregation NB Nillegoda, J Kirstein, A Szlachcic, M Berynskyy, A Stank, F Stengel, ... Nature 524 (7564), 247-251, 2015 | 363 | 2015 |
Protein binding pocket dynamics A Stank, DB Kokh, JC Fuller, RC Wade Accounts of chemical research 49 (5), 809-815, 2016 | 352 | 2016 |
Simulation of the diffusional association of barnase and barstar RR Gabdoulline, RC Wade Biophysical journal 72 (5), 1917-1929, 1997 | 331 | 1997 |
Prediction of drug binding affinities by comparative binding energy analysis AR Ortiz, MT Pisabarro, F Gago, RC Wade Journal of medicinal chemistry 38 (14), 2681-2691, 1995 | 327 | 1995 |
Redesigning dehalogenase access tunnels as a strategy for degrading an anthropogenic substrate M Pavlova, M Klvana, Z Prokop, R Chaloupkova, P Banas, M Otyepka, ... Nature chemical biology 5 (10), 727-733, 2009 | 316 | 2009 |
Allostery in its many disguises: from theory to applications SJ Wodak, E Paci, NV Dokholyan, IN Berezovsky, A Horovitz, J Li, ... Structure 27 (4), 566-578, 2019 | 307 | 2019 |
Further development of hydrogen bond functions for use in determining energetically favorable binding sites on molecules of known structure. 1. Ligand probe groups with the … RC Wade, KJ Clark, PJ Goodford Journal of Medicinal Chemistry 36 (1), 140-147, 1993 | 298 | 1993 |
Improving the continuum dielectric approach to calculating p K as of ionizable groups in proteins E Demchuk, RC Wade The Journal of Physical Chemistry 100 (43), 17373-17387, 1996 | 284 | 1996 |
Further development of hydrogen bond functions for use in determining energetically favorable binding sites on molecules of known structure. 2. Ligand probe groups with the … RC Wade, PJ Goodford Journal of medicinal chemistry 36 (1), 148-156, 1993 | 277 | 1993 |
Protein-protein association: investigation of factors influencing association rates by Brownian dynamics simulations RR Gabdoulline, RC Wade Journal of molecular biology 306 (5), 1139-1155, 2001 | 262 | 2001 |
Computational approaches to identifying and characterizing protein binding sites for ligand design S Henrich, OMH Salo‐Ahen, B Huang, FF Rippmann, G Cruciani, ... Journal of Molecular Recognition: An Interdisciplinary Journal 23 (2), 209-219, 2010 | 254 | 2010 |
Electrostatic steering and ionic tethering in enzyme–ligand binding: Insights from simulations RC Wade, RR Gabdoulline, SK Lüdemann, V Lounnas Proceedings of the National Academy of Sciences 95 (11), 5942-5949, 1998 | 250 | 1998 |
Biomolecular diffusional association RR Gabdoulline, RC Wade Current opinion in structural biology 12 (2), 204-213, 2002 | 243 | 2002 |
Molecular docking using surface complementarity V Sobolev, RC Wade, G Vriend, M Edelman Proteins: Structure, Function, and Bioinformatics 25 (1), 120-129, 1996 | 234 | 1996 |
Modeling and simulation of protein–surface interactions: achievements and challenges M Ozboyaci, DB Kokh, S Corni, RC Wade Quarterly reviews of biophysics 49, e4, 2016 | 229 | 2016 |
Brownian dynamics simulation of protein–protein diffusional encounter RR Gabdoulline, RC Wade Methods 14 (3), 329-341, 1998 | 222 | 1998 |