Self-assembling multidomain peptide fibers with aromatic cores EL Bakota, O Sensoy, B Ozgur, M Sayar, JD Hartgerink Biomacromolecules 14 (5), 1370-1378, 2013 | 100 | 2013 |
Perturbation–response scanning reveals key residues for allosteric control in Hsp70 D Penkler, O Sensoy, C Atilgan, O Tastan Bishop Journal of Chemical Information and Modeling 57 (6), 1359-1374, 2017 | 65 | 2017 |
A mechanistic role of Helix 8 in GPCRs: Computational modeling of the dopamine D2 receptor interaction with the GIPC1–PDZ-domain O Sensoy, H Weinstein Biochimica et Biophysica Acta (BBA)-Biomembranes 1848 (4), 976-983, 2015 | 52 | 2015 |
Driving Forces for Adsorption of Amphiphilic Peptides to the Air− Water Interface O Engin, A Villa, M Sayar, B Hess The Journal of Physical Chemistry B 114 (34), 11093-11101, 2010 | 38 | 2010 |
A transferable coarse-grained model for diphenylalanine: How to represent an environment driven conformational transition C Dalgicdir, O Sensoy, C Peter, M Sayar The Journal of Chemical Physics 139 (23), 2013 | 36 | 2013 |
A Challenge for Peptide Coarse Graining: Transferability of Fragment‐Based Models O Engin, A Villa, C Peter, M Sayar Macromolecular theory and simulations 20 (7), 451-465, 2011 | 36 | 2011 |
Understanding the differential selectivity of arrestins toward the phosphorylation state of the receptor O Sensoy, IS Moreira, G Morra ACS Chemical Neuroscience 7 (9), 1212-1224, 2016 | 24 | 2016 |
Perturb–Scan–Pull: A Novel Method Facilitating Conformational Transitions in Proteins F Jalalypour, O Sensoy, C Atilgan Journal of Chemical Theory and Computation 16 (6), 3825-3841, 2020 | 21 | 2020 |
Prediction and targeting of interaction interfaces in G-protein coupled receptor oligomers AC Schiedel, M Kose, C Barreto, B Bueschbell, G Morra, O Sensoy, ... Current topics in medicinal chemistry 18 (8), 714-746, 2018 | 21 | 2018 |
FbpA iron storage and release are governed by periplasmic microenvironments O Sensoy, AR Atilgan, C Atilgan Physical Chemistry Chemical Physics 19 (8), 6064-6075, 2017 | 20 | 2017 |
A GIPC1-Palmitate switch modulates dopamine Drd3 receptor trafficking and signaling M Arango-Lievano, O Sensoy, A Borie, M Corbani, G Guillon, P Sokoloff, ... Molecular and cellular biology 36 (6), 1019-1031, 2016 | 17 | 2016 |
Dimethyl sulfoxide reduces the stability but enhances catalytic activity of the main SARS‐CoV‐2 protease 3CLpro JC Ferreira, S Fadl, M Ilter, H Pekel, R Rezgui, O Sensoy, WM Rabeh The FASEB Journal 35 (8), 2021 | 15 | 2021 |
Adsorption, folding, and packing of an amphiphilic peptide at the air/water interface O Engin, M Sayar The Journal of Physical Chemistry B 116 (7), 2198-2207, 2012 | 15 | 2012 |
Utilization of biased G protein-coupled receptor signaling towards development of safer and personalized therapeutics M Ilter, S Mansoor, O Sensoy Molecules 24 (11), 2052, 2019 | 14 | 2019 |
Computational studies of G protein-coupled receptor complexes: Structure and dynamics O Sensoy, JG Almeida, J Shabbir, IS Moreira, G Morra Methods in Cell Biology 142, 205-245, 2017 | 14 | 2017 |
Linker residues regulate the activity and stability of hexokinase 2, a promising anticancer target JC Ferreira, AR Khrbtli, CL Shetler, S Mansoor, L Ali, O Sensoy, ... Journal of Biological Chemistry 296, 2021 | 11 | 2021 |
Computational approaches in antibody-drug conjugate optimization for targeted cancer therapy R Melo, A Lemos, AJ Preto, JG Almeida, JDG Correia, O Sensoy, ... Current Topics in Medicinal Chemistry 18 (13), 1091-1109, 2018 | 11 | 2018 |
The introduction of hydrogen bond and hydrophobicity effects into the rotational isomeric states model for conformational analysis of unfolded peptides O Engin, M Sayar, B Erman Physical Biology 6 (1), 016001, 2009 | 10 | 2009 |
Inhibition of SARS-CoV-2 main protease: a repurposing study that targets the dimer interface of the protein H Pekel, M Ilter, O Sensoy Journal of Biomolecular Structure and Dynamics 40 (15), 7167-7182, 2022 | 9 | 2022 |
Mechanistic insight into the impact of a bivalent ligand on the structure and dynamics of a GPCR oligomer S Mansoor, G Kayık, S Durdagi, O Sensoy Computational and Structural Biotechnology Journal 20, 925-936, 2022 | 9 | 2022 |