Three-dimensional protein structure prediction: Methods and computational strategies M Dorn, MB e Silva, LS Buriol, LC Lamb Computational biology and chemistry 53, 251-276, 2014 | 248 | 2014 |
Cumida: An extensively curated microarray database for benchmarking and testing of machine learning approaches in cancer research BC Feltes, EB Chandelier, BI Grisci, M Dorn Journal of Computational Biology 26 (4), 376-386, 2019 | 97 | 2019 |
Aromatic rings commonly used in medicinal chemistry: force fields comparison and interactions with water toward the design of new chemical entities MD Polêto, VH Rusu, BI Grisci, M Dorn, RD Lins, H Verli Frontiers in pharmacology 9, 395, 2018 | 59 | 2018 |
APL: An angle probability list to improve knowledge-based metaheuristics for the three-dimensional protein structure prediction B Borguesan, MB e Silva, B Grisci, M Inostroza-Ponta, M Dorn Computational biology and chemistry 59, 142-157, 2015 | 52 | 2015 |
Hemogram data as a tool for decision-making in COVID-19 management: applications to resource scarcity scenarios E Avila, A Kahmann, C Alho, M Dorn PeerJ 8, e9482, 2020 | 45 | 2020 |
Neuroevolution as a tool for microarray gene expression pattern identification in cancer research BI Grisci, BC Feltes, M Dorn Journal of biomedical informatics 89, 122-133, 2019 | 37 | 2019 |
A GMDH polynomial neural network-based method to predict approximate three-dimensional structures of polypeptides M Dorn, ALS Braga, CH Llanos, LS Coelho Expert Systems with Applications 39 (15), 12268-12279, 2012 | 35 | 2012 |
A memetic algorithm for 3D protein structure prediction problem L Correa, B Borguesan, C Farfán, M Inostroza-Ponta, M Dorn IEEE/ACM transactions on computational biology and bioinformatics 15 (3 …, 2016 | 32 | 2016 |
A memetic algorithm based on an NSGA-II scheme for phylogenetic tree inference M Villalobos-Cid, M Dorn, R Ligabue-Braun, M Inostroza-Ponta IEEE transactions on evolutionary computation 23 (5), 776-787, 2018 | 30 | 2018 |
The tale of a versatile enzyme: Alpha-amylase evolution, structure, and potential biotechnological applications for the bioremediation of n-alkanes ÉSM Pinto, M Dorn, BC Feltes Chemosphere 250, 126202, 2020 | 28 | 2020 |
Relevance aggregation for neural networks interpretability and knowledge discovery on tabular data BI Grisci, MJ Krause, M Dorn Information sciences 559, 111-129, 2021 | 25 | 2021 |
Nias-server: Neighbors influence of amino acids and secondary structures in proteins B Borguesan, M Inostroza-Ponta, M Dorn Journal of Computational Biology 24 (3), 255-265, 2017 | 25 | 2017 |
A hybrid genetic algorithm for the 3-d protein structure prediction problem using a path-relinking strategy M Dorn, LS Buriol, LC Lamb 2011 IEEE Congress of Evolutionary Computation (CEC), 2709-2716, 2011 | 25 | 2011 |
Three-dimensional protein structure prediction based on memetic algorithms L de Lima Corrêa, B Borguesan, MJ Krause, M Dorn Computers & Operations Research 91, 160-177, 2018 | 24 | 2018 |
Multi-approach bioinformatics analysis of curated omics data provides a gene expression panorama for multiple cancer types BC Feltes, JF Poloni, IJG Nunes, SS Faria, M Dorn Frontiers in genetics 11, 586602, 2020 | 22 | 2020 |
A multi-objective gene clustering algorithm guided by apriori biological knowledge with intensification and diversification strategies J Parraga-Alava, M Dorn, M Inostroza-Ponta BioData mining 11, 1-22, 2018 | 22 | 2018 |
CReF: A central-residue-fragment-based method for predicting approximate 3-D polypeptides structures M Dorn, ON de Souza Proceedings of the 2008 ACM symposium on Applied computing, 1261-1267, 2008 | 21 | 2008 |
Conformational changes in 2-trans-enoyl-ACP (CoA) reductase (InhA) from M. tuberculosis induced by an inorganic complex: a molecular dynamics simulation study ALP da Costa, I Pauli, M Dorn, EK Schroeder, CG Zhan, ... Journal of molecular modeling 18, 1779-1790, 2012 | 20 | 2012 |
A hybrid method for the protein structure prediction problem M Dorn, A Breda, O Norberto de Souza Advances in Bioinformatics and Computational Biology: Third Brazilian …, 2008 | 20 | 2008 |
A multi-population memetic algorithm for the 3-D protein structure prediction problem L de Lima Corrêa, M Dorn Swarm and Evolutionary Computation 55, 100677, 2020 | 18 | 2020 |