CATH: comprehensive structural and functional annotations for genome sequences I Sillitoe, TE Lewis, A Cuff, S Das, P Ashford, NL Dawson, N Furnham, ... Nucleic acids research 43 (D1), D376-D381, 2015 | 482 | 2015 |
New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures I Sillitoe, AL Cuff, BH Dessailly, NL Dawson, N Furnham, D Lee, JG Lees, ... Nucleic Acids Research 41 (D1), D490-D498, 2013 | 275 | 2013 |
Resolving the Ortholog Conjecture: Orthologs Tend to Be Weakly, but Significantly, More Similar in Function than Paralogs AM Altenhoff, RA Studer, M Robinson-Rechavi, C Dessimoz PLoS Computational Biology 8 (5), e1002514, 2012 | 257 | 2012 |
Epithelial Sodium Transport and its control by aldosterone: The Story of our Internal Environment revisited BC Rossier, ME Baker, RA Studer Physiological Reviews 95 (1), 297-340, 2015 | 239 | 2015 |
Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes RA Studer, BH Dessailly, CA Orengo Biochemical Journal 449 (3), 581-594, 2013 | 234 | 2013 |
How confident can we be that orthologs are similar, but paralogs differ? RA Studer, M Robinson-Rechavi Trends in Genetics 25 (5), 210-216, 2009 | 190 | 2009 |
Stability-activity tradeoffs constrain the adaptive evolution of RubisCO RA Studer, PA Christin, MA Williams, CA Orengo Proceedings of the National Academy of Sciences, 201310811, 2014 | 169 | 2014 |
Vitellogenin underwent subfunctionalization to acquire caste and behavioral specific expression in the harvester ant Pogonomyrmex barbatus M Corona, R Libbrecht, Y Wurm, O Riba-Grognuz, RA Studer, L Keller PLoS Genet 9 (8), e1003730, 2013 | 115 | 2013 |
Origin of the response to adrenal and sex steroids: Roles of promiscuity and co-evolution of enzymes and steroid receptors ME Baker, DR Nelson, RA Studer The Journal of steroid biochemistry and molecular biology 151, 12-24, 2015 | 96 | 2015 |
Evolution of protein phosphorylation across 18 fungal species RA Studer, RA Rodriguez-Mias, KM Haas, JI Hsu, C Viéitez, C Solé, ... Science 354 (6309), 229-232, 2016 | 92 | 2016 |
Pervasive positive selection on duplicated and nonduplicated vertebrate protein coding genes RA Studer, S Penel, L Duret, M Robinson-Rechavi Genome research 18 (9), 1393-1402, 2008 | 86 | 2008 |
Adaptive divergence of ancient gene duplicates in the avian MHC class II β R Burri, N Salamin, RA Studer, A Roulin, L Fumagalli Molecular biology and evolution 27 (10), 2360-2374, 2010 | 82 | 2010 |
Selectome update: quality control and computational improvements to a database of positive selection S Moretti, B Laurenczy, WH Gharib, B Castella, A Kuzniar, H Schabauer, ... Nucleic acids research 42 (D1), D917-D921, 2014 | 75 | 2014 |
Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis JG Lees, D Lee, RA Studer, NL Dawson, I Sillitoe, S Das, C Yeats, ... Nucleic acids research 42 (D1), D240-D245, 2014 | 64 | 2014 |
Selectome: a database of positive selection E Proux, RA Studer, S Moretti, M Robinson-Rechavi Nucleic acids research 37 (suppl 1), D404-D407, 2009 | 53 | 2009 |
Evolution of the epithelial sodium channel and the sodium pump as limiting factors of aldosterone action on sodium transport RA Studer, E Person, M Robinson-Rechavi, BC Rossier Physiological Genomics 43 (13), 844-854, 2011 | 50 | 2011 |
Structural and evolutionary innovation of the heterodimerization interface between USP and the ecdysone receptor ECR in insects T Iwema, A Chaumot, RA Studer, M Robinson-Rechavi, IML Billas, ... Molecular biology and evolution 26 (4), 753-768, 2009 | 49 | 2009 |
Conserved phosphorylation hotspots in eukaryotic protein domain families MJ Strumillo, M Oplova, C Vieitez, D Ochoa, M Shahraz, BP Busby, ... bioRxiv, 391185, 2018 | 44 | 2018 |
Collembolan Transcriptomes Highlight Molecular Evolution of Hexapods and Provide Clues on the Adaptation to Terrestrial Life A Faddeeva, RA Studer, K Kraaijeveld, D Sie, B Ylstra, J Mariën, ... PloS one 10 (6), e0130600, 2015 | 33 | 2015 |
iProteinDB: an integrative database of Drosophila post-translational modifications Y Hu, R Sopko, V Chung, RA Studer, SD Landry, D Liu, L Rabinow, ... bioRxiv, 386268, 2018 | 28 | 2018 |