IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies LT Nguyen, HA Schmidt, A Von Haeseler, BQ Minh Molecular biology and evolution 32 (1), 268-274, 2015 | 18586 | 2015 |
ModelFinder: fast model selection for accurate phylogenetic estimates S Kalyaanamoorthy, BQ Minh, TKF Wong, A Von Haeseler, LS Jermiin Nature methods 14 (6), 587-589, 2017 | 10878 | 2017 |
IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era BQ Minh, HA Schmidt, O Chernomor, D Schrempf, MD Woodhams, ... Molecular biology and evolution 37 (5), 1530-1534, 2020 | 7218 | 2020 |
UFBoot2: improving the ultrafast bootstrap approximation DT Hoang, O Chernomor, A Von Haeseler, BQ Minh, LS Vinh Molecular biology and evolution 35 (2), 518-522, 2018 | 6679 | 2018 |
W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis J Trifinopoulos, LT Nguyen, A von Haeseler, BQ Minh Nucleic acids research 44 (W1), W232-W235, 2016 | 3727 | 2016 |
Ultrafast approximation for phylogenetic bootstrap BQ Minh, MAT Nguyen, A Von Haeseler Molecular biology and evolution 30 (5), 1188-1195, 2013 | 3531 | 2013 |
Quartet puzzling: a quartet maximum-likelihood method for reconstructing tree topologies K Strimmer, A Von Haeseler Molecular biology and evolution 13 (7), 964-969, 1996 | 2905 | 1996 |
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing HA Schmidt, K Strimmer, M Vingron, A Von Haeseler Bioinformatics 18 (3), 502-504, 2002 | 2890 | 2002 |
Terrace aware data structure for phylogenomic inference from supermatrices O Chernomor, A Von Haeseler, BQ Minh Systematic biology 65 (6), 997-1008, 2016 | 1647 | 2016 |
Accurate detection of complex structural variations using single-molecule sequencing FJ Sedlazeck, P Rescheneder, M Smolka, H Fang, M Nattestad, ... Nature methods 15 (6), 461-468, 2018 | 1301 | 2018 |
RETRACTED ARTICLE: TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics G Jobb, A Von Haeseler, K Strimmer BMC evolutionary biology 4, 1-9, 2004 | 1276 | 2004 |
Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment K Strimmer, A Von Haeseler Proceedings of the National Academy of Sciences 94 (13), 6815-6819, 1997 | 1008 | 1997 |
DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA M Hofreiter, V Jaenicke, D Serre, A Haeseler, S Pääbo Nucleic acids research 29 (23), 4793-4799, 2001 | 856 | 2001 |
Unexpected complexity of the Wnt gene family in a sea anemone A Kusserow, K Pang, C Sturm, M Hrouda, J Lentfer, HA Schmidt, ... Nature 433 (7022), 156-160, 2005 | 691 | 2005 |
A view of Neandertal genetic diversity M Krings, C Capelli, F Tschentscher, H Geisert, S Meyer, A Von Haeseler, ... Nature genetics 26 (2), 144-146, 2000 | 510 | 2000 |
Thiol-linked alkylation of RNA to assess expression dynamics VA Herzog, B Reichholf, T Neumann, P Rescheneder, P Bhat, TR Burkard, ... Nature methods 14 (12), 1198-1204, 2017 | 484 | 2017 |
Updating benchtop sequencing performance comparison S Jünemann, FJ Sedlazeck, K Prior, A Albersmeier, U John, J Kalinowski, ... Nature biotechnology 31 (4), 294-296, 2013 | 481 | 2013 |
The performance of phylogenetic algorithms in estimating haplotype genealogies with migration W Salzburger, GB Ewing, A Von Haeseler Molecular ecology 20 (9), 1952-1963, 2011 | 411 | 2011 |
NextGenMap: fast and accurate read mapping in highly polymorphic genomes FJ Sedlazeck, P Rescheneder, A Von Haeseler Bioinformatics 29 (21), 2790-2791, 2013 | 406 | 2013 |
Comparative evolutionary analysis of rDNA ITS regions in Drosophila. C Schlötterer, MT Hauser, A von Haeseler, D Tautz Molecular biology and evolution 11 (3), 513-522, 1994 | 405 | 1994 |