| Detecting SARS-CoV-2 lineages and mutational load in municipal wastewater and a use-case in the metropolitan area of Thessaloniki, Greece N Pechlivanis, M Tsagiopoulou, MC Maniou, A Togkousidis, ... Scientific reports 12 (1), 2659, 2022 | 28 | 2022 |
| UMIc: a preprocessing method for UMI deduplication and reads correction M Tsagiopoulou, MC Maniou, N Pechlivanis, A Togkousidis, M Kotrová, ... Frontiers in Genetics 12, 660366, 2021 | 15 | 2021 |
| Adaptive RAxML-NG: accelerating phylogenetic inference under maximum likelihood using dataset difficulty A Togkousidis, OM Kozlov, J Haag, D Höhler, A Stamatakis Molecular Biology and Evolution 40 (10), msad227, 2023 | 13 | 2023 |
| Much Ado About Nothing: Accelerating Maximum Likelihood Phylogenetic Inference via Early Stopping to evade (Over-) optimization A Togkousidis, A Stamatakis, O Gascuel bioRxiv, 2024.07. 04.602058, 2024 | | 2024 |
| Parallel Inference of Phylogenetic Stands with Gentrius A Togkousidis, O Chernomor, A Stamatakis 2023 IEEE International Parallel and Distributed Processing Symposium …, 2023 | | 2023 |
| miRkit: R framework analyzing miRNA PCR array data M Tsagiopoulou, A Togkousidis, N Pechlivanis, MC Maniou, A Batsali, ... BMC Research Notes 14, 1-5, 2021 | | 2021 |
| A Computational Framework for Pattern Detection on Unaligned Sequences: An Application on SARS-CoV-2 Data N Pechlivanis, A Togkousidis, M Tsagiopoulou, S Sgardelis, I Kappas, ... Frontiers in Genetics 12, 618170, 2021 | | 2021 |
| Determining a novel feature-space for SARS-CoV-2 sequence data F Ballesio, AH Bangash, D Barradas Bautista, J Barton, A Guarracino, ... Center for Open Science, 2020 | | 2020 |
| Convent of the Sacred Heart Libraries M Tsagiopoulou, A Togkousidis, N Pechlivanis, MC Maniou, A Batsali, ... | | |
