Deep learning–based cell composition analysis from tissue expression profiles K Menden, M Marouf, S Oller, A Dalmia, DS Magruder, K Kloiber, ... Science advances 6 (30), eaba2619, 2020 | 162 | 2020 |
Evidence for GRN connecting multiple neurodegenerative diseases MA Nalls, C Blauwendraat, L Sargent, D Vitale, H Leonard, H Iwaki, ... Brain Communications 3 (2), fcab095, 2021 | 28 | 2021 |
nf-core/viralrecon: nf-core/viralrecon v2. 5-Manganese Monkey H Patel, S Varona, S Monzón, J Espinosa-Carrasco, ML Heuer, NC Bot, ... Epub ahead of print 13, 2022 | 15 | 2022 |
Distinct cell type-specific protein signatures in GRN and MAPT genetic subtypes of frontotemporal dementia SSM Miedema, MO Mol, FTW Koopmans, DC Hondius, P van Nierop, ... Acta neuropathologica communications 10 (1), 100, 2022 | 14 | 2022 |
RORγt inhibitors block both IL-17 and IL-22 conferring a potential advantage over anti-IL-17 alone to treat severe asthma D Lamb, D De Sousa, K Quast, K Fundel-Clemens, JS Erjefält, C Sandén, ... Respiratory Research 22 (1), 158, 2021 | 12 | 2021 |
Integrated multi-omics analysis reveals common and distinct dysregulated pathways for genetic subtypes of Frontotemporal Dementia K Menden, M Francescatto, T Nyima, C Blauwendraat, A Dhingra, ... bioRxiv, 2020.12. 01.405894, 2020 | 12 | 2020 |
First insights into the nature and evolution of antisense transcription in nematodes C Rödelsperger, K Menden, V Serobyan, H Witte, P Baskaran BMC Evolutionary Biology 16, 1-14, 2016 | 12 | 2016 |
nf-core/viralrecon: nf-core/viralrecon v2. 2-Tin Turtle H Patel, S Varona, S Monzón, J Espinosa-Carrasco, ML Heuer, ... Zenodo https://doi. org/10 5281, 2021 | 8 | 2021 |
Pathogen detection in RNA-seq data with Pathonoia AM Liebhoff, K Menden, A Laschtowitz, A Franke, C Schramm, S Bonn BMC bioinformatics 24 (1), 53, 2023 | 4 | 2023 |
A multi-omics dataset for the analysis of frontotemporal dementia genetic subtypes K Menden, M Francescatto, T Nyima, C Blauwendraat, A Dhingra, ... Scientific data 10 (1), 849, 2023 | 3 | 2023 |
A Multi-omics Data Resource for Frontotemporal Dementia Research P Heutink, K Menden, A Dalmia Frontotemporal Dementias: Emerging Milestones of the 21st Century, 269-282, 2021 | 2 | 2021 |
mlf-core: a framework for deterministic machine learning L Heumos, P Ehmele, L Kuhn Cuellar, K Menden, E Miller, S Lemke, ... Bioinformatics 39 (4), btad164, 2023 | 1 | 2023 |
Evidence for GRN as part of a neuroinflammatory mechanism connecting common neurodegenerative diseases: Genomic data analysis within an open science framework … MA Nalls, C Blauwendraat, L Sargent, D Vitale, H Leonard, H Iwaki, ... medRxiv, 2020.12. 04.20243600, 2020 | 1 | 2020 |
mlf-core: a framework for deterministic machine learning S Nahnsen, G Gabernet, S Lemke, E Miller, K Menden, LK Cuellar, ... Bioinformatics 39 (4), 2023 | | 2023 |
BRAIN COMMUNICATIONS AIN COMMUNICATIONS DC Alsop, JM Andreano, N Carvalho, M Brickhouse, R Jones, ... | | 2022 |
Computational methods and analyses to dissect the pathogenesis of Frontotemporal Dementia K Menden Universität Tübingen, 2021 | | 2021 |