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Nikos Pechlivanis
Nikos Pechlivanis
Institute of Applied Biosciences, Centre for Research & Technology, Hellas
在 certh.gr 的电子邮件经过验证
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Detecting SARS-CoV-2 lineages and mutational load in municipal wastewater and a use-case in the metropolitan area of Thessaloniki, Greece
N Pechlivanis, M Tsagiopoulou, MC Maniou, A Togkousidis, ...
Scientific reports 12 (1), 2659, 2022
282022
TRIP-T cell receptor/immunoglobulin profiler
MT Kotouza, K Gemenetzi, C Galigalidou, E Vlachonikola, N Pechlivanis, ...
BMC bioinformatics 21, 1-21, 2020
172020
UMIc: a preprocessing method for UMI deduplication and reads correction
M Tsagiopoulou, MC Maniou, N Pechlivanis, A Togkousidis, M Kotrová, ...
Frontiers in Genetics 12, 660366, 2021
152021
IgIDivA: immunoglobulin intraclonal diversification analysis
L Zaragoza-Infante, V Junet, N Pechlivanis, SC Fragkouli, ...
Briefings in Bioinformatics 23 (5), bbac349, 2022
82022
Chromatin activation profiling of stereotyped chronic lymphocytic leukemias reveals a subset 8–specific signature
M Tsagiopoulou, V Chapaprieta, N Russiñol, B García-Torre, ...
Blood, The Journal of the American Society of Hematology 141 (24), 2955-2960, 2023
62023
Tracking SARS-CoV-2 variants of concern in wastewater: an assessment of nine computational tools using simulated genomic data
SG Sutcliffe, SA Kraemer, I Ellmen, JJ Knapp, AK Overton, D Nash, ...
Microbial Genomics 10 (5), 001249, 2024
52024
Exploring plant diversity through soil DNA in Thai national parks for influencing land reform and agriculture planning
M Osathanunkul, N Sawongta, W Pheera, N Pechlivanis, F Psomopoulos, ...
PeerJ 9, e11753, 2021
42021
N-Glycosylation of the Ig Receptors Shapes the Antigen Reactivity in Chronic Lymphocytic Leukemia Subset #201
A Iatrou, M Gounari, E Sofou, L Zaragoza-Infante, I Markopoulos, ...
The Journal of Immunology 211 (5), 743-754, 2023
32023
T cell receptor gene repertoire profiles in subgroups of patients with chronic lymphocytic leukemia bearing distinct genomic aberrations
E Vlachonikola, N Pechlivanis, G Karakatsoulis, E Sofou, G Gkoliou, ...
Frontiers in Oncology 13, 1097942, 2023
32023
InterTADs: integration of multi-omics data on topologically associated domains, application to chronic lymphocytic leukemia
M Tsagiopoulou, N Pechlivanis, MC Maniou, F Psomopoulos
NAR Genomics and Bioinformatics 4 (1), lqab121, 2022
32022
Intranuclear inclusions of polyQ-expanded ATXN1 sequester RNA molecules
I Gkekas, AC Vagiona, N Pechlivanis, G Kastrinaki, K Pliatsika, S Iben, ...
Frontiers in Molecular Neuroscience 16, 1280546, 2023
22023
Evidence of somatic hypermutation in the antigen binding sites of patients with CLL harboring IGHV genes with 100% germline identity
E Sofou, L Zaragoza-Infante, N Pechlivanis, G Karakatsoulis, ...
Frontiers in Oncology 12, 1079772, 2022
22022
Molecular and Functional Profiling of Microenvironmental Interactions in Splenic Marginal Zone Lymphoma
M Gerousi, A Iatrou, A Mingos, N Pechlivanis, S Ntoufa, M Gounari, ...
Blood 140 (Supplement 1), 9294-9295, 2022
12022
Structural and Functional Analysis of the Clonotypic B Cell Receptor Immunoglobulin in Splenic Marginal Zone Lymphoma: Ontogenetic and Therapeutic Implications
A Iatrou, M Patrone, I Sarrigeorgiou, N Pechlivanis, DG Oscier, ...
Blood 144 (Supplement 1), 975-975, 2024
2024
Comparative Analysis of T Cell Profiles in Splenic Small B-Cell Malignancies
E Vlachonikola, A Mingos, P Rock, G Gkoliou, M Gerousi, M Fitopoulou, ...
Blood 144, 3000, 2024
2024
Binning of metagenomic sequencing data
N Pechlivanis, FE Psomopoulos
Galaxy Training Network, 2024
2024
Microbial co-occurrence network demonstrates spatial and climatic trends for global soil diversity
N Pechlivanis, G Karakatsoulis, K Kyritsis, M Tsagiopoulou, S Sgardelis, ...
Scientific Data 11 (1), 672, 2024
2024
IκBε deficiency accelerates disease development in chronic lymphocytic leukemia
J Bordini, C Lenzi, M Frenquelli, A Morabito, A Pseftogas, D Belloni, ...
Leukemia 38 (6), 1287-1298, 2024
2024
Synth4bench: a framework for generating synthetic genomics data for the evaluation of tumor-only somatic variant calling algorithms
SC Fragkouli, N Pechlivanis, A Anastasiadou, G Karakatsoulis, A Orfanou, ...
bioRxiv, 2024.03. 07.582313, 2024
2024
microGalaxy: A gateway to tools, workflows, and training for reproducible and FAIR analysis of microbial data
E Nasr, P Amato, A Bhardwaj, D Blankenberg, D Brites, F Cumbo, K Do, ...
bioRxiv, 2024.12. 23.629682, 2024
2024
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