Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager JAF Yates, TC Lamnidis, M Borry, AA Valtueña, Z Fagernäs, S Clayton, ... PeerJ 9, e10947, 2021 | 79* | 2021 |
DamageProfiler: fast damage pattern calculation for ancient DNA J Neukamm, A Peltzer, K Nieselt Bioinformatics 37 (20), 3652-3653, 2021 | 77 | 2021 |
Ancient bacterial genomes reveal a high diversity of Treponema pallidum strains in early modern Europe K Majander, S Pfrengle, A Kocher, J Neukamm, L Du Plessis, M Pla-Díaz, ... Current Biology 30 (19), 3788-3803. e10, 2020 | 73 | 2020 |
2000-year-old pathogen genomes reconstructed from metagenomic analysis of Egyptian mummified individuals J Neukamm, S Pfrengle, M Molak, A Seitz, M Francken, P Eppenberger, ... BMC biology 18, 1-18, 2020 | 54 | 2020 |
Large-scale mitogenomic analysis of the phylogeography of the Late Pleistocene cave bear J Gretzinger, M Molak, E Reiter, S Pfrengle, C Urban, J Neukamm, ... Scientific Reports 9 (1), 10700, 2019 | 48 | 2019 |
New ancient Eastern European Yersinia pestis genomes illuminate the dispersal of plague in Europe I Morozova, A Kasianov, S Bruskin, J Neukamm, M Molak, E Batieva, ... Philosophical transactions of the Royal Society B 375 (1812), 20190569, 2020 | 39 | 2020 |
Variola virus genome sequenced from an eighteenth-century museum specimen supports the recent origin of smallpox G Ferrari, J Neukamm, HT Baalsrud, AM Breidenstein, M Ravinet, ... Philosophical Transactions of the Royal Society B 375 (1812), 20190572, 2020 | 34 | 2020 |
Comparison of target enrichment strategies for ancient pathogen DNA A Furtwängler, J Neukamm, L Böhme, E Reiter, M Vollstedt, N Arora, ... Biotechniques 69 (6), 455-459, 2020 | 30 | 2020 |
Mycobacterium leprae diversity and population dynamics in medieval Europe from novel ancient genomes S Pfrengle, J Neukamm, M Guellil, M Keller, M Molak, C Avanzi, ... BMC biology 19, 1-18, 2021 | 28 | 2021 |
Assessing metagenomic signals recovered from Lyuba, a 42,000-year-old permafrost-preserved woolly mammoth calf G Ferrari, HEL Lischer, J Neukamm, E Rayo, N Borel, A Pospischil, ... Genes 9 (9), 436, 2018 | 8 | 2018 |
Non-destructive extraction of DNA from preserved tissues in medical collections E Rayo, G Ferrari, J Neukamm, G Akgül, AM Breidenstein, M Cooke, ... BioTechniques 72 (2), 60-64, 2022 | 5 | 2022 |
Ongoing tissue changes in an experimentally mummified human leg I Morozova, LM Öhrström, P Eppenberger, B Bode‐Lesniewska, ... The Anatomical Record 303 (12), 3085-3095, 2020 | 3 | 2020 |
Metagenomic analysis of Ancient Egyptian canopic jars E Rayo, J Neukamm, N Tomoum, P Eppenberger, A Breidenstein, ... American journal of biological anthropology 179 (2), 307-313, 2022 | 1 | 2022 |
Novel interactive methods for ancient and mitochondrial DNA analysis J Neukamm Universität Tübingen, 2022 | | 2022 |
New perspectives on Nubian ancestry: Paleogenomic investigation of the ancient Middle Nile Region AM Breidenstein, J Neukamm, C Barbieri, G Ferrari, ... AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 171, 36-36, 2020 | | 2020 |
Parameters used for MALT analysis from Variola virus genome sequenced from an eighteenth-century museum specimen supports the recent origin of smallpox G Ferrari, J Neukamm, HT Baalsrud, AM Breidenstein, M Ravinet, ... Figshare, 2020 | | 2020 |
BEAST configuration including samples from the Czech national museum from Variola virus genome sequenced from an eighteenth-century museum specimen supports the recent origin … G Ferrari, J Neukamm, HT Baalsrud, AM Breidenstein, M Ravinet, ... Figshare, 2020 | | 2020 |
Mycobacterium leprae diversity and population dynamics in medieval Europe from novel ancient genomes ST Cole, M Guellil, NY Berezina, K Tambets, C Cessford, E Reiter, ... | | |