ESPResSo 4.0–an extensible software package for simulating soft matter systems F Weik, R Weeber, K Szuttor, K Breitsprecher, J de Graaf, M Kuron, ... The European Physical Journal Special Topics 227, 1789-1816, 2019 | 197 | 2019 |
Modeling the separation of macromolecules: A review of current computer simulation methods GW Slater, C Holm, MV Chubynsky, HW de Haan, A Dubé, K Grass, ... Electrophoresis 30 (5), 792-818, 2009 | 155 | 2009 |
Simulations of ionization equilibria in weak polyelectrolyte solutions and gels J Landsgesell, L Nová, O Rud, F Uhlík, D Sean, P Hebbeker, C Holm, ... Soft Matter 15 (6), 1155-1185, 2019 | 91 | 2019 |
Interfacing solid‐state nanopores with gel media to slow DNA translocations M Waugh, A Carlsen, D Sean, GW Slater, K Briggs, H Kwok, ... Electrophoresis 36 (15), 1759-1767, 2015 | 43 | 2015 |
Free Energy of a Polymer in Slit-like Confinement from the Odijk Regime to the Bulk JS Leith, A Kamanzi, D Sean, D Berard, AC Guthrie, CMJ McFaul, ... Macromolecules 49 (23), 9266-9271, 2016 | 31 | 2016 |
Translocation of a polymer through a nanopore starting from a confining nanotube D Sean, HW de Haan, GW Slater Electrophoresis 36 (5), 682-691, 2015 | 27 | 2015 |
Using a Péclet number for the translocation of a polymer through a nanopore to tune coarse-grained simulations to experimental conditions HW de Haan, D Sean, GW Slater Physical Review E 91 (2), 022601, 2015 | 24 | 2015 |
Computer simulations of static and dynamical properties of weak polyelectrolyte nanogels in salty solutions D Sean, J Landsgesell, C Holm Gels 4 (1), 2, 2017 | 21 | 2017 |
Modeling gel swelling equilibrium in the mean field: From explicit to poisson-boltzmann models J Landsgesell, D Sean, P Kreissl, K Szuttor, C Holm Physical Review Letters 122 (20), 208002, 2019 | 20 | 2019 |
Highly driven polymer translocation from a cylindrical cavity with a finite length D Sean, GW Slater The Journal of Chemical Physics 146 (5), 2017 | 12 | 2017 |
Physical confinement signals regulate the organization of stem cells in three dimensions SV Hadjiantoniou, D Sean, M Ignacio, M Godin, GW Slater, AE Pelling Journal of The Royal Society Interface 13 (123), 20160613, 2016 | 12 | 2016 |
Reducing the variance in the translocation times by stretching the polymer HW de Haan, D Sean, GW Slater Physical Review E 98 (2), 022501, 2018 | 7 | 2018 |
Langevin dynamcis simulations of driven polymer translocation into a cross‐linked gel D Sean, GW Slater Electrophoresis 38 (5), 653-658, 2017 | 5 | 2017 |
Electrophoretic mobility of partially denatured DNA in a gel: Qualitative and semiquantitative differences between bubbles and split ends D Sean, GW Slater Electrophoresis 33 (9‐10), 1341-1348, 2012 | 5 | 2012 |
Rotation-induced macromolecular spooling of DNA TN Shendruk, D Sean, D Berard, J Wolf, J Dragoman, S Battat, GW Slater, ... Physical Review X 7 (3), 031005, 2017 | 3 | 2017 |
Physical interpretation of the Lr parameter in the theory for the gel electrophoresis of partially denatured DNA D Sean, GW Slater Electrophoresis 31 (20), 3446-3449, 2010 | 3 | 2010 |
Influence of weak groups on polyelectrolyte mobilities D Sean, J Landsgesell, C Holm Electrophoresis 40 (5), 799-809, 2019 | 2 | 2019 |
Gel electrophoresis of DNA partially denatured at the ends: What are the dominant conformations? D Sean, GW Slater Electrophoresis 34 (5), 745-752, 2013 | 2 | 2013 |
Can gel concentration gradients improve two‐dimensional DNA displays? D Sean, YE Wang, GW Slater Electrophoresis 35 (5), 736-745, 2014 | 1 | 2014 |
Erratum: Modeling Gel Swelling Equilibrium in the Mean Field: From Explicit to Poisson-Boltzmann Models [Phys. Rev. Lett. 122, 208002 (2019)] J Landsgesell, D Sean, P Kreissl, K Szuttor, C Holm Physical Review Letters 124 (11), 119901, 2020 | | 2020 |