The AURKA/TPX2 axis drives colon tumorigenesis cooperatively with MYC Y Takahashi, P Sheridan, A Niida, G Sawada, R Uchi, H Mizuno, ... Annals of Oncology 26 (5), 935-942, 2015 | 109 | 2015 |
PAFit: A statistical method for measuring preferential attachment in temporal complex networks T Pham, P Sheridan, H Shimodaira PloS one 10 (9), e0137796, 2015 | 82 | 2015 |
Joint estimation of preferential attachment and node fitness in growing complex networks T Pham, P Sheridan, H Shimodaira Scientific Reports 6, 32558, 2016 | 75 | 2016 |
A novel ASXL1–OGT axis plays roles in H3K4 methylation and tumor suppression in myeloid malignancies D Inoue, T Fujino, P Sheridan, Y Zhang, R Nagase, S Horikawa, Z Li, ... Leukemia 32 (6), 1327-1337, 2018 | 66 | 2018 |
Identification of RNA-binding protein LARP4B as a tumor suppressor in glioma H Koso, H Yi, P Sheridan, S Miyano, Y Ino, T Todo, S Watanabe Cancer Research 76 (8), 2254-2264, 2016 | 50 | 2016 |
A Preferential Attachment Paradox: How Preferential Attachment Combines with Growth to Produce Networks with Log-normal In-degree Distributions P Sheridan, T Onodera Scientific Reports 8 (1), 1-11, 2018 | 37 | 2018 |
A scale-free structure prior for graphical models with applications in functional genomics P Sheridan, T Kamimura, H Shimodaira PLoS One 5 (11), e13580, 2010 | 37 | 2010 |
Large-scale DNA barcode library generation for biomolecule identification in high-throughput screens E Lyons, P Sheridan, G Tremmel, S Miyano, S Sugano Scientific Reports 7 (1), 1-7, 2017 | 25 | 2017 |
A preferential attachment model with Poisson growth for scale-free networks P Sheridan, Y Yagahara, H Shimodaira Annals of the institute of statistical mathematics 60, 747-761, 2008 | 22 | 2008 |
Measuring preferential attachment in growing networks with missing-timelines using Markov chain Monte Carlo P Sheridan, Y Yagahara, H Shimodaira Physica A: Statistical Mechanics and its Applications 391 (20), 5031-5040, 2012 | 20 | 2012 |
An ontology-based recommender system with an application to the Star Trek television franchise P Sheridan, M Onsjö, C Becerra, S Jimenez, G Dueñas Future Internet 11 (9), 182, 2019 | 19 | 2019 |
PAFit: An R Package for the Non-Parametric Estimation of Preferential Attachment and Node Fitness in Temporal Complex Networks T Pham, P Sheridan, H Shimodaira Journal of Statistical Software 92 (3), 2020 | 17 | 2020 |
PAFIT: An R package for estimating preferential attachment and node fitness in temporal complex networks T Pham, P Sheridan, H Shimodaira arXiv preprint arXiv:1704.06017, 2017 | 8 | 2017 |
Theme Enrichment Analysis: A Statistical Test for Identifying Significantly Enriched Themes in a List of Stories with an Application to the Star Trek Television Franchise M Onsjö, P Sheridan Digital Studies / Le champ numérique 10 (1), 1, 2020 | 6 | 2020 |
Bromodomain protein BRD8 regulates cell cycle progression in colorectal cancer cells through a TIP60-independent regulation of the pre-RC complex K Yamaguchi, S Nakagawa, A Saku, Y Isobe, R Yamaguchi, P Sheridan, ... Iscience 26 (4), 2023 | 5 | 2023 |
Nonparametric estimation of the preferential attachment function in complex networks: evidence of deviations from log linearity T Pham, P Sheridan, H Shimodaira Proceedings of ECCS 2014: European Conference on Complex Systems, 141-153, 2016 | 5 | 2016 |
PAFit: Nonparametric Estimation of Preferential Attachment and Node Fitness in Temporal Complex Networks T Pham, P Sheridan, H Shimodaira R package version 0.7, 2015 | 5 | 2015 |
The Literary Theme Ontology for Media Annotation and Information Retrieval P Sheridan, M Onsjö, J Hastings Proceedings of the Joint Ontology Workshops 2019 2581, 2019 | 4 | 2019 |
A Preferential Attachment Paradox: How does Preferential Attachment Combine with Growth to Produce Networks with Log-normal In-degree Distributions? P Sheridan, T Onodera preprint, 2017 | 4 | 2017 |
A hypergeometric test interpretation of a common TF-IDF variant P Sheridan, M Onsjö arXiv preprint arXiv:2002.11844 52, 2020 | 2 | 2020 |