The MARTINI force field: coarse grained model for biomolecular simulations SJ Marrink, HJ Risselada, S Yefimov, DP Tieleman, AH De Vries The journal of physical chemistry B 111 (27), 7812-7824, 2007 | 5871 | 2007 |
The MARTINI coarse-grained force field: extension to proteins L Monticelli, SK Kandasamy, X Periole, RG Larson, DP Tieleman, ... Journal of chemical theory and computation 4 (5), 819-834, 2008 | 2710 | 2008 |
Improved parameters for the martini coarse-grained protein force field DH De Jong, G Singh, WFD Bennett, C Arnarez, TA Wassenaar, ... Journal of chemical theory and computation 9 (1), 687-697, 2013 | 1366 | 2013 |
Perspective on the Martini model SJ Marrink, DP Tieleman Chemical Society Reviews 42 (16), 6801-6822, 2013 | 1240 | 2013 |
GROMACS user manual version 3.2 D van der Spoel, E Lindahl, B Hess, AR Van Buuren, E Apol, ... Nijenborgh 4, 9747, 2004 | 1030* | 2004 |
A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems DP Tieleman, SJ Marrink, HJC Berendsen Biochimica et Biophysica Acta (BBA)-Reviews on Biomembranes 1331 (3), 235-270, 1997 | 1016 | 1997 |
Computational Lipidomics with insane: A Versatile Tool for Generating Custom Membranes for Molecular Simulations TA Wassenaar, HI Ingólfsson, RA Bockmann, DP Tieleman, SJ Marrink Journal of chemical theory and computation 11 (5), 2144-2155, 2015 | 984 | 2015 |
Lipid organization of the plasma membrane HI Ingólfsson, MN Melo, FJ Van Eerden, C Arnarez, CA Lopez, ... Journal of the american chemical society 136 (41), 14554-14559, 2014 | 887 | 2014 |
Martini 3: a general purpose force field for coarse-grained molecular dynamics PCT Souza, R Alessandri, J Barnoud, S Thallmair, I Faustino, ... Nature methods 18 (4), 382-388, 2021 | 699 | 2021 |
Effect of lipid peroxidation on the properties of lipid bilayers: a molecular dynamics study J Wong-Ekkabut, Z Xu, W Triampo, I Tang, D Peter Tieleman, L Monticelli Biophysical journal 93 (12), 4225-4236, 2007 | 690 | 2007 |
Going backward: a flexible geometric approach to reverse transformation from coarse grained to atomistic models TA Wassenaar, K Pluhackova, RA Bockmann, SJ Marrink, DP Tieleman Journal of chemical theory and computation 10 (2), 676-690, 2014 | 666 | 2014 |
Computational modeling of realistic cell membranes SJ Marrink, V Corradi, PCT Souza, HI Ingolfsson, DP Tieleman, ... Chemical reviews 119 (9), 6184-6226, 2019 | 598 | 2019 |
Molecular dynamics simulations of a fully hydrated dipalmitoylphosphatidylcholine bilayer with different macroscopic boundary conditions and parameters DP Tieleman, HJC Berendsen The Journal of chemical physics 105 (11), 4871-4880, 1996 | 592 | 1996 |
Computer simulation study of fullerene translocation through lipid membranes J Wong-Ekkabut, S Baoukina, W Triampo, IM Tang, DP Tieleman, ... Nature nanotechnology 3 (6), 363-368, 2008 | 590 | 2008 |
Distribution of amino acids in a lipid bilayer from computer simulations JL MacCallum, WFD Bennett, DP Tieleman Biophysical journal 94 (9), 3393-3404, 2008 | 590 | 2008 |
Simulation of pore formation in lipid bilayers by mechanical stress and electric fields DP Tieleman, H Leontiadou, AE Mark, SJ Marrink Journal of the American Chemical Society 125 (21), 6382-6383, 2003 | 551 | 2003 |
Setting up and running molecular dynamics simulations of membrane proteins C Kandt, WL Ash, D Peter Tieleman Methods 41 (4), 475-488, 2007 | 517 | 2007 |
The molecular basis of electroporation DP Tieleman BMC biochemistry 5, 1-12, 2004 | 516 | 2004 |
Lipids on the move: simulations of membrane pores, domains, stalks and curves SJ Marrink, AH De Vries, DP Tieleman Biochimica et Biophysica Acta (BBA)-Biomembranes 1788 (1), 149-168, 2009 | 501 | 2009 |
A molecular dynamics study of the pores formed by Escherichia coli OmpF porin in a fully hydrated palmitoyloleoylphosphatidylcholine bilayer DP Tieleman, HJC Berendsen Biophysical journal 74 (6), 2786-2801, 1998 | 430 | 1998 |