| An information-based sequence distance and its application to whole mitochondrial genome phylogeny M Li, JH Badger, X Chen, S Kwong, P Kearney, H Zhang Bioinformatics 17 (2), 149-154, 2001 | 699 | 2001 |
| Organelle proteomics: looking at less to see more S Brunet, P Thibault, E Gagnon, P Kearney, JJM Bergeron, M Desjardins Trends in cell biology 13 (12), 629-638, 2003 | 219 | 2003 |
| A blood-based proteomic classifier for the molecular characterization of pulmonary nodules X Li, C Hayward, PY Fong, M Dominguez, SW Hunsucker, LW Lee, ... Science translational medicine 5 (207), 207ra142-207ra142, 2013 | 207 | 2013 |
| Assessment of plasma proteomics biomarker’s ability to distinguish benign from malignant lung nodules: results of the PANOPTIC (Pulmonary Nodule Plasma Proteomic Classifier) trial GA Silvestri, NT Tanner, P Kearney, A Vachani, PP Massion, A Porter, ... Chest 154 (3), 491-500, 2018 | 146 | 2018 |
| Management of pulmonary nodules by community pulmonologists: a multicenter observational study NT Tanner, J Aggarwal, MK Gould, P Kearney, G Diette, A Vachani, ... Chest 148 (6), 1405-1414, 2015 | 145 | 2015 |
| Development and validation of a spontaneous preterm delivery predictor in asymptomatic women GR Saade, KA Boggess, SA Sullivan, GR Markenson, JD Iams, ... American journal of obstetrics and gynecology 214 (5), 633. e1-633. e24, 2016 | 124 | 2016 |
| A polynomial time approximation scheme for inferring evolutionary trees from quartet topologies and its application T Jiang, P Kearney, M Li SIAM Journal on Computing 30 (6), 1942-1961, 2001 | 123 | 2001 |
| Extensive cell envelope modulation is associated with virulence in Brucella abortus J Lamontagne, H Butler, E Chaves-Olarte, J Hunter, M Schirm, C Paquet, ... Journal of proteome research 6 (4), 1519-1529, 2007 | 117 | 2007 |
| Quartet cleaning: improved algorithms and simulations V Berry, T Jiang, P Kearney, M Li, T Wareham Algorithms-ESA’99: 7th Annual European Symposium Prague, Czech Republic …, 1999 | 93 | 1999 |
| Phylogenetic k-Root and Steiner k-Root GH Lin, PE Kearney, T Jiang Algorithms and Computation: 11th International Conference, ISAAC 2000 Taipei …, 2000 | 88 | 2000 |
| Modulation of the phagosome proteome by interferon-γ I Jutras, M Houde, N Currier, J Boulais, S Duclos, S LaBoissiere, ... Molecular & Cellular Proteomics 7 (4), 697-715, 2008 | 86 | 2008 |
| Bioinformatics meets proteomics—bridging the gap between mass spectrometry data analysis and cell biology P Kearney, P Thibault Journal of bioinformatics and computational biology 1 (01), 183-200, 2003 | 80 | 2003 |
| A practical algorithm for recovering the best supported edges of an evolutionary tree V Berry, D Bryant, T Jiang, PE Kearney, M Li, T Wareham, H Zhang SODA, 287-296, 2000 | 74 | 2000 |
| Computing the quartet distance between evolutionary trees D Bryant, J Tsang, PE Kearney, M Li Symposium on Discrete Algorithms: Proceedings of the eleventh annual ACM …, 2000 | 73 | 2000 |
| Analysis of codon usage patterns of bacterial genomes using the self-organizing map HC Wang, J Badger, P Kearney, M Li Molecular Biology and Evolution 18 (5), 792-800, 2001 | 71 | 2001 |
| Orchestrating quartets: approximation and data correction T Jiang, P Kearney, M Li Proceedings 39th Annual Symposium on Foundations of Computer Science (Cat …, 1998 | 71 | 1998 |
| Validation of a multiprotein plasma classifier to identify benign lung nodules A Vachani, HI Pass, WN Rom, DE Midthun, ES Edell, M Laviolette, XJ Li, ... Journal of Thoracic Oncology 10 (4), 629-637, 2015 | 69 | 2015 |
| Tree powers PE Kearney, DG Corneil Journal of Algorithms 29 (1), 111-131, 1998 | 68 | 1998 |
| Selected reaction monitoring assays PE Kearney, XJ Li, C Hayward, MD Geeraerts US Patent 9,091,651, 2015 | 65 | 2015 |
| Efficient generation of uniform samples from phylogenetic trees P Kearney, JI Munro, D Phillips International workshop on algorithms in bioinformatics, 177-189, 2003 | 54 | 2003 |
