Network-based approach to identify molecular signatures and therapeutic agents in Alzheimer’s disease MR Rahman, T Islam, B Turanli, T Zaman, HM Faruquee, MM Rahman, ... Computational biology and chemistry 78, 431-439, 2019 | 104 | 2019 |
Drug repositioning for effective prostate cancer treatment B Turanli, M Grøtli, J Boren, J Nielsen, M Uhlen, KY Arga, A Mardinoglu Frontiers in physiology 9, 500, 2018 | 102 | 2018 |
Impact of SRT on the efficiency and microbial community of sequential anaerobic and aerobic membrane bioreactors for the treatment of textile industry wastewater A Yurtsever, B Calimlioglu, E Sahinkaya Chemical Engineering Journal 314, 378-387, 2017 | 99 | 2017 |
Simultaneous bioreduction of nitrate and chromate using sulfur-based mixotrophic denitrification process E Sahinkaya, A Kilic, B Calimlioglu, Y Toker Journal of hazardous materials 262, 234-239, 2013 | 93 | 2013 |
Tissue-specific molecular biomarker signatures of type 2 diabetes: an integrative analysis of transcriptomics and protein–protein interaction data B Calimlioglu, K Karagoz, T Sevimoglu, E Kilic, E Gov, KY Arga Omics: a journal of integrative biology 19 (9), 563-573, 2015 | 86 | 2015 |
Discovery of therapeutic agents for prostate cancer using genome-scale metabolic modeling and drug repositioning B Turanli, C Zhang, W Kim, R Benfeitas, M Uhlen, KY Arga, A Mardinoglu EBioMedicine 42, 386-396, 2019 | 79 | 2019 |
Identification of prognostic biomarker signatures and candidate drugs in colorectal cancer: insights from systems biology analysis MR Rahman, T Islam, E Gov, B Turanli, G Gulfidan, M Shahjaman, ... Medicina 55 (1), 20, 2019 | 79 | 2019 |
Systems biology based drug repositioning for development of cancer therapy B Turanli, O Altay, J Borén, H Turkez, J Nielsen, M Uhlen, KY Arga, ... Seminars in Cancer Biology, 2021 | 78 | 2021 |
Drug targeting and biomarkers in head and neck cancers: insights from systems biology analyses T Islam, R Rahman, E Gov, B Turanli, G Gulfidan, A Haque, KY Arga, ... Omics: a journal of integrative biology 22 (6), 422-436, 2018 | 63 | 2018 |
Effect of NaCl concentration on the performance of sequential anaerobic and aerobic membrane bioreactors treating textile wastewater A Yurtsever, B Calimlioglu, M Görür, Ö Çınar, E Sahinkaya Chemical Engineering Journal 287, 456-465, 2016 | 62 | 2016 |
A network-based cancer drug discovery: from integrated multi-omics approaches to precision medicine B Turanli, K Karagoz, G Gulfidan, R Sinha, A Mardinoglu, KY Arga Current pharmaceutical design 24 (32), 3778-3790, 2018 | 60 | 2018 |
Comprehensive Analysis of RNA-Seq Gene Expression Profiling of Brain Transcriptomes Reveals Novel Genes, Regulators, and Pathways in Autism Spectrum Disorder MR Rahman, MC Petralia, R Ciurleo, A Bramanti, P Fagone, ... Brain Sciences 10 (10), 747, 2020 | 48 | 2020 |
Multi-omic data interpretation to repurpose subtype specific drug candidates for breast cancer B Turanli, K Karagoz, G Bidkhori, R Sinha, ML Gatza, M Uhlen, ... Frontiers in genetics 10, 420, 2019 | 46 | 2019 |
Pan-cancer mapping of differential protein-protein interactions G Gulfidan, B Turanli, H Beklen, R Sinha, KY Arga Scientific reports 10 (1), 3272, 2020 | 44 | 2020 |
Simultaneous nitrate and perchlorate removal from groundwater by heterotrophic-autotrophic sequential system D Ucar, EU Cokgor, E Sahinkaya, U Cetin, C Bereketoglu, B Calimlioglu, ... International Biodeterioration & Biodegradation 116, 83-90, 2017 | 36 | 2017 |
Current State of “Omics” Biomarkers in Pancreatic Cancer B Turanli, E Yildirim, G Gulfidan, KY Arga, R Sinha Journal of Personalized Medicine 11 (127), 2021 | 32 | 2021 |
Transcriptomic-Guided Drug Repositioning Supported by a New Bioinformatics Search Tool: geneXpharma B Turanli, G Gulfidan, KY Arga OMICS: A Journal of Integrative Biology 21 (10), 584-591, 2017 | 30 | 2017 |
Systems biomarkers in psoriasis: integrative evaluation of computational and experimental data at transcript and protein levels T Sevimoglu, B Turanli, C Bereketoglu, KY Arga, AS Karadag Gene 647, 157-163, 2018 | 25 | 2018 |
Systems biomarkers for papillary thyroid cancer prognosis and treatment through multi-omics networks G Gulfidan, M Soylu, D Demirel, HBC Erdonmez, H Beklen, PO Sarica, ... Archives of biochemistry and biophysics 715, 109085, 2022 | 22 | 2022 |
Drug repositioning for P-glycoprotein mediated co-expression networks in colorectal cancer H Beklen, G Gulfidan, KY Arga, A Mardinoglu, B Turanli Frontiers in oncology 10, 1273, 2020 | 19 | 2020 |