Root of the tree: the significance, evolution, and origins of the ribosome JC Bowman, AS Petrov, M Frenkel-Pinter, PI Penev, LD Williams Chemical reviews 120 (11), 4848-4878, 2020 | 153 | 2020 |
Translation: the universal structural core of life CR Bernier, AS Petrov, NA Kovacs, PI Penev, LD Williams Molecular Biology and Evolution 35 (8), 2065-2076, 2018 | 80 | 2018 |
G-quadruplexes in human ribosomal RNA S Mestre-Fos, PI Penev, S Suttapitugsakul, M Hu, C Ito, AS Petrov, ... Journal of molecular biology 431 (10), 1940-1955, 2019 | 54 | 2019 |
A blueprint for academic laboratories to produce SARS-CoV-2 quantitative RT-PCR test kits SJ Mascuch, S Fakhretaha-Aval, JC Bowman, MTH Ma, G Thomas, ... Journal of Biological Chemistry 295 (46), 15438-15453, 2020 | 39* | 2020 |
Supersized ribosomal RNA expansion segments in Asgard archaea PI Penev, S Fakhretaha-Aval, VJ Patel, JJ Cannone, RR Gutell, AS Petrov, ... Genome biology and evolution 12 (10), 1694-1710, 2020 | 38* | 2020 |
Widespread stop-codon recoding in bacteriophages may regulate translation of lytic genes AL Borges, YC Lou, R Sachdeva, B Al-Shayeb, PI Penev, AL Jaffe, S Lei, ... Nature microbiology 7 (6), 918-927, 2022 | 33 | 2022 |
Fold evolution before LUCA: common ancestry of SH3 domains and OB domains C Alvarez-Carreño, PI Penev, AS Petrov, LD Williams Molecular Biology and Evolution 38 (11), 5134-5143, 2021 | 23 | 2021 |
Profusion of G-quadruplexes on both subunits of metazoan ribosomes S Mestre-Fos, PI Penev, JC Richards, WL Dean, RD Gray, JB Chaires, ... PLoS One 14 (12), e0226177, 2019 | 19 | 2019 |
A widespread group of large plasmids in methanotrophic Methanoperedens archaea MC Schoelmerich, HT Ouboter, R Sachdeva, PI Penev, Y Amano, ... Nature communications 13 (1), 7085, 2022 | 17 | 2022 |
ProteoVision: web server for advanced visualization of ribosomal proteins PI Penev, HM McCann, CD Meade, C Alvarez-Carreno, A Maddala, ... Nucleic acids research 49 (W1), W578-W588, 2021 | 12 | 2021 |
Phage-encoded ribosomal protein S21 expression is linked to late-stage phage replication LX Chen, AL Jaffe, AL Borges, PI Penev, TC Nelson, LA Warren, ... ISME communications 2 (1), 31, 2022 | 11 | 2022 |
TwinCons: Conservation score for uncovering deep sequence similarity and divergence PI Penev, C Alvarez-Carreño, E Smith, AS Petrov, LD Williams PLoS Computational Biology 17 (10), e1009541, 2021 | 11 | 2021 |
Circular permutation obscures universality of a ribosomal protein NA Kovacs, PI Penev, A Venapally, AS Petrov, LD Williams Journal of Molecular Evolution 86, 581-592, 2018 | 10 | 2018 |
Rare ribosomal RNA sequences from archaea stabilize the bacterial ribosome AJ Nissley, PI Penev, ZL Watson, JF Banfield, JHD Cate Nucleic Acids Research 51 (4), 1880-1894, 2023 | 8 | 2023 |
Chapter 5: Major Biological Innovations in the History of Life on Earth GO Bozdag, N Szeinbaum, PL Conlin, K Chen, SM Fos, A Garcia, ... Astrobiology 24 (S1), S-107-S-123, 2024 | 1 | 2024 |
AbGradCon 2021: lessons in digital meetings, international collaboration, and interdisciplinarity in astrobiology TZ Jia, KN Johnson-Finn, OM Alian, I Bonati, K Fujishima, N Grefenstette, ... International Journal of Astrobiology 21 (6), 497-523, 2022 | 1 | 2022 |
Methanotrophic Methanoperedens archaea host diverse and interacting extrachromosomal elements LD Shi, J West-Roberts, MC Schoelmerich, PI Penev, LX Chen, Y Amano, ... Nature Microbiology, 1-12, 2024 | | 2024 |
RiboVision2: A Web Server for Advanced Visualization of Ribosomal RNAs HM McCann, CD Meade, B Banerjee, PI Penev, LD Williams, AS Petrov Journal of Molecular Biology, 168556, 2024 | | 2024 |
Chapter 1: The Astrobiology Primer 3.0 MJ Schaible, N Szeinbaum, GO Bozdag, L Chou, N Grefenstette, ... Astrobiology 24 (S1), S-4-S-39, 2024 | | 2024 |
Quantifying active microbiomes and mineral carbon persistence with depth and time in California grasslands P Penev, JF Banfield, J Pett-Ridge, S Blazewicz, K Estera-Molina AGU Fall Meeting Abstracts 2023 (2024), B13J-2024, 2023 | | 2023 |