PupaSuite: finding functional single nucleotide polymorphisms for large-scale genotyping purposes L Conde, JM Vaquerizas, H Dopazo, L Arbiza, J Reumers, F Rousseau, ... Nucleic acids research 34 (suppl_2), W621-W625, 2006 | 259 | 2006 |
Positive selection, relaxation, and acceleration in the evolution of the human and chimp genome L Arbiza, J Dopazo, H Dopazo PLoS computational biology 2 (4), e38, 2006 | 164 | 2006 |
From genes to functional classes in the study of biological systems F Al-Shahrour, L Arbiza, H Dopazo, J Huerta-Cepas, P Mínguez, ... BMC bioinformatics 8, 1-17, 2007 | 161 | 2007 |
Genome-wide inference of natural selection on human transcription factor binding sites L Arbiza, I Gronau, BA Aksoy, MJ Hubisz, B Gulko, A Keinan, A Siepel Nature genetics 45 (7), 723-729, 2013 | 142 | 2013 |
Indigenous Arabs are descendants of the earliest split from ancient Eurasian populations JL Rodriguez-Flores, K Fakhro, F Agosto-Perez, MD Ramstetter, L Arbiza, ... Genome research 26 (2), 151-162, 2016 | 104 | 2016 |
Inference of natural selection from interspersed genomic elements based on polymorphism and divergence I Gronau, L Arbiza, J Mohammed, A Siepel Molecular biology and evolution 30 (5), 1159-1171, 2013 | 97 | 2013 |
Analyses of X-linked and autosomal genetic variation in population-scale whole genome sequencing S Gottipati, L Arbiza, A Siepel, AG Clark, A Keinan Nature genetics 43 (8), 741-743, 2011 | 92 | 2011 |
Sexual selection drives weak positive selection in protamine genes and high promoter divergence, enhancing sperm competitiveness J Martin-Coello, H Dopazo, L Arbiza, J Ausio, ERS Roldan, M Gomendio Proceedings of the Royal Society B: Biological Sciences 276 (1666), 2427-2436, 2009 | 75 | 2009 |
Contrasting X-linked and autosomal diversity across 14 human populations L Arbiza, S Gottipati, A Siepel, A Keinan The American Journal of Human Genetics 94 (6), 827-844, 2014 | 70 | 2014 |
Phylemon: a suite of web tools for molecular evolution, phylogenetics and phylogenomics J Tárraga, I Medina, L Arbiza, J Huerta-Cepas, T Gabaldon, J Dopazo, ... Nucleic acids research 35 (suppl_2), W38-W42, 2007 | 55 | 2007 |
Selective pressures at a codon-level predict deleterious mutations in human disease genes L Arbiza, S Duchi, D Montaner, J Burguet, D Pantoja-Uceda, ... Journal of molecular biology 358 (5), 1390-1404, 2006 | 53 | 2006 |
Use of estimated evolutionary strength at the codon level improves the prediction of disease‐related protein mutations in humans E Capriotti, L Arbiza, R Casadio, J Dopazo, H Dopazo, MA Marti‐Renom Human Mutation 29 (1), 198-204, 2008 | 51 | 2008 |
Cis-regulatory elements and human evolution A Siepel, L Arbiza Current Opinion in Genetics & Development 29 (Genetics of human evolution …, 2014 | 47 | 2014 |
NRE: a tool for exploring neutral loci in the human genome L Arbiza, E Zhong, A Keinan BMC bioinformatics 13, 1-6, 2012 | 42 | 2012 |
Genome-wide heterogeneity of nucleotide substitution model fit L Arbiza, M Patricio, H Dopazo, D Posada Genome biology and evolution 3, 896-908, 2011 | 37 | 2011 |
Evolutionary Genomics of Genes Involved in Olfactory Behavior in the Drosophila melanogaster Species Group N Lavagnino, F Serra, L Arbiza, H Dopazo, E Hasson Evolutionary Bioinformatics 8, EBO. S8484, 2012 | 31 | 2012 |
Strong constraint on human genes escaping X-inactivation is modulated by their expression level and breadth in both sexes A Slavney, L Arbiza, AG Clark, A Keinan Molecular biology and evolution 33 (2), 384-393, 2016 | 27 | 2016 |
Clustered mutations in hominid genome evolution are consistent with APOBEC3G enzymatic activity Y Pinto, O Gabay, L Arbiza, AJ Sams, A Keinan, EY Levanon Genome research 26 (5), 579-587, 2016 | 19 | 2016 |
Population genomic analysis of 962 whole genome sequences of humans reveals natural selection in non-coding regions F Yu, J Lu, X Liu, E Gazave, D Chang, S Raj, H Hunter-Zinck, R Blekhman, ... PLoS One 10 (3), e0121644, 2015 | 16 | 2015 |
Compositions and methods for library sequencing R Nugent, S Chen, L Arbiza, E Toro, M Bocek US Patent App. 17/410,962, 2022 | 14 | 2022 |