| Multiple sclerosis patients have a distinct gut microbiota compared to healthy controls J Chen, N Chia, KR Kalari, JZ Yao, M Novotna, MMP Soldan, DH Luckey, ... Scientific Reports 6, 28484, 2016 | 910 | 2016 |
| An expansion of rare lineage intestinal microbes characterizes rheumatoid arthritis J Chen, K Wright, JM Davis, P Jeraldo, EV Marietta, J Murray, H Nelson, ... Genome Medicine 8 (1), 43, 2016 | 754 | 2016 |
| Diet and exercise orthogonally alter the gut microbiome and reveal independent associations with anxiety and cognition SS Kang, PR Jeraldo, A Kurti, ME Berg Miller, MD Cook, K Whitlock, ... Molecular Neurodegeneration 9 (1), 36, 2014 | 364 | 2014 |
| The microbiome of the chicken gastrointestinal tract CJ Yeoman, N Chia, P Jeraldo, M Sipos, ND Goldenfeld, BA White Animal Health Research Reviews 13 (01), 89-99, 2012 | 347 | 2012 |
| Pregnancy's Stronghold on the Vaginal Microbiome MRS Walther-António, P Jeraldo, ME Berg Miller, CJ Yeoman, KE Nelson, ... PLOS ONE 9 (6), e98514, 2014 | 226 | 2014 |
| Identification of Prosthetic Joint Infection Pathogens Using a Shotgun Metagenomics Approach M Thoendel, P Jeraldo, KE Greenwood-Quaintance, J Yao, N Chia, ... Clinical Infectious Diseases 67 (9), 1333–1338, 2018 | 213 | 2018 |
| Suppression of Inflammatory Arthritis by Human Gut‐Derived Prevotella histicola in Humanized Mice EV Marietta, JA Murray, DH Luckey, PR Jeraldo, A Lamba, R Patel, ... Arthritis & Rheumatology 68 (12), 2878-2888, 2016 | 209 | 2016 |
| Prolonged use of a proton pump inhibitor reduces microbial diversity: implications for Clostridium difficile susceptibility CT Seto, P Jeraldo, R Orenstein, N Chia, JK DiBaise Microbiome 2 (1), 42, 2014 | 180 | 2014 |
| Quantification of the relative roles of niche and neutral processes in structuring gastrointestinal microbiomes P Jeraldo, M Sipos, N Chia, JM Brulc, AS Dhillon, ME Konkel, CL Larson, ... Proceedings of the National Academy of Sciences 109 (25), 9692-9698, 2012 | 162 | 2012 |
| Direct Detection and Identification of Prosthetic Joint Infection Pathogens in Synovial Fluid by Metagenomic Shotgun Sequencing MI Ivy, MJ Thoendel, PR Jeraldo, KE Greenwood-Quaintance, ... Journal of Clinical Microbiology 56 (9), e00402-18, 2018 | 155 | 2018 |
| Direct Detection and Identification of Prosthetic Joint Pathogens in Synovial Fluid (SF) by Metagenomic Shotgun Sequencing M Ivy, M Thoendel, P Jeraldo, K Greenwood-Quaintance, AD Hanssen, ... Open Forum Infectious Diseases 4 (suppl_1), S32-S32, 2017 | 155* | 2017 |
| Clostridioides difficile uses amino acids associated with gut microbial dysbiosis in a subset of patients with diarrhea EJ Battaglioli, VL Hale, J Chen, P Jeraldo, C Ruiz-Mojica, BA Schmidt, ... Science Translational Medicine 10 (464), eaam7019, 2018 | 152 | 2018 |
| Comparison of microbial DNA enrichment tools for metagenomic whole genome sequencing M Thoendel, PR Jeraldo, KE Greenwood-Quaintance, JZ Yao, N Chia, ... Journal of Microbiological Methods, 2016 | 149 | 2016 |
| A comprehensive analysis of breast cancer microbiota and host gene expression KJ Thompson, JN Ingle, X Tang, N Chia, PR Jeraldo, MR Walther-Antonio, ... PloS one 12 (11), e0188873, 2017 | 145 | 2017 |
| Distinct microbes, metabolites, and ecologies define the microbiome in deficient and proficient mismatch repair colorectal cancers VL Hale, P Jeraldo, J Chen, M Mundy, J Yao, S Priya, G Keeney, K Lyke, ... Genome Medicine 10, 78, 2018 | 110 | 2018 |
| IM-TORNADO: A Tool for Comparison of 16S Reads from Paired-End Libraries P Jeraldo, K Kalari, X Chen, J Bhavsar, A Mangalam, B White, H Nelson, ... PLOS ONE 9 (12), e110804, 2014 | 100 | 2014 |
| An Increased Abundance of Clostridiaceae Characterizes Arthritis in Inflammatory Bowel Disease and Rheumatoid Arthritis DA Muñiz Pedrogo, J Chen, B Hillmann, P Jeraldo, G Al-Ghalith, V Taneja, ... Inflammatory Bowel Diseases 25 (5), 902–913, 2018 | 81 | 2018 |
| A Novel Prosthetic Joint Infection Pathogen, Mycoplasma salivarium, Identified by Metagenomic Shotgun Sequencing M Thoendel, P Jeraldo, KE Greenwood-Quaintance, N Chia, MP Abdel, ... Clinical Infectious Diseases 65 (2), 332-335, 2017 | 79 | 2017 |
| Impact of Contaminating DNA in Whole-Genome Amplification Kits Used for Metagenomic Shotgun Sequencing for Infection Diagnosis M Thoendel, P Jeraldo, KE Greenwood-Quaintance, J Yao, N Chia, ... Journal of Clinical Microbiology 55 (6), 1789-1801, 2017 | 75 | 2017 |
| On the suitability of short reads of 16S rRNA for phylogeny‐based analyses in environmental surveys P Jeraldo, N Chia, N Goldenfeld Environmental Microbiology 13 (11), 3000-3009, 2011 | 72 | 2011 |
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