Genomic analysis of Salmonella enterica serovar Typhimurium DT160 associated with a 14-year outbreak, New Zealand, 1998–2012 SJ Bloomfield, J Benschop, PJ Biggs, JC Marshall, DTS Hayman, ... Emerging infectious diseases 23 (6), 906, 2017 | 35 | 2017 |
Characterization of a pESI-like plasmid and analysis of multidrug-resistant Salmonella enterica Infantis isolates in England and Wales WWY Lee, J Mattock, DR Greig, GC Langridge, D Baker, S Bloomfield, ... Microbial genomics 7 (10), 000658, 2021 | 27 | 2021 |
Campylobacter novaezeelandiae sp. nov., isolated from birds and water in New Zealand S Bloomfield, D Wilkinson, L Rogers, P Biggs, N French, V Mohan, ... International Journal of Systematic and Evolutionary Microbiology 70 (6 …, 2020 | 15 | 2020 |
Determination and quantification of microbial communities and antimicrobial resistance on food through host DNA-depleted metagenomics SJ Bloomfield, AL Zomer, J O'grady, GL Kay, J Wain, N Janecko, R Palau, ... Food Microbiology 110, 104162, 2023 | 14 | 2023 |
Whole genome sequencing reveals great diversity of Vibrio spp in prawns at retail N Janecko, SJ Bloomfield, R Palau, AE Mather Microbial Genomics 7 (9), 000647, 2021 | 12 | 2021 |
Mobility of antimicrobial resistance across serovars and disease presentations in non-typhoidal Salmonella from animals and humans in Vietnam S Bloomfield, VT Duong, HT Tuyen, JI Campbell, NR Thomson, J Parkhill, ... Microbial Genomics 8 (5), 000798, 2022 | 11 | 2022 |
Use of genomics to investigate historical importation of Shiga toxin–producing Escherichia coli serogroup O26 and nontoxigenic variants into New Zealand AS Browne, PJ Biggs, DA Wilkinson, AL Cookson, AC Midwinter, ... Emerging Infectious Diseases 25 (3), 489, 2019 | 11 | 2019 |
Whole-genome sequencing of Salmonella Mississippi and Typhimurium definitive type 160, Australia and New Zealand L Ford, D Ingle, K Glass, M Veitch, DA Williamson, M Harlock, J Gregory, ... Emerging Infectious Diseases 25 (9), 1690, 2019 | 10 | 2019 |
Long-term Colonization by Campylobacter jejuni Within a Human Host: Evolution, Antimicrobial Resistance, and Adaptation SJ Bloomfield, AC Midwinter, PJ Biggs, NP French, JC Marshall, ... The Journal of Infectious Diseases 217 (1), 103-111, 2018 | 10 | 2018 |
Repeated cross-sectional study identifies differing risk factors associated with microbial contamination in common food products in the United Kingdom N Janecko, R Zamudio, R Palau, SJ Bloomfield, AE Mather Food Microbiology 111, 104196, 2023 | 6 | 2023 |
Genomic adaptations of Campylobacter jejuni to long-term human colonization SJ Bloomfield, AC Midwinter, PJ Biggs, NP French, JC Marshall, ... Gut pathogens 13 (1), 72, 2021 | 6 | 2021 |
Investigation of the validity of two Bayesian ancestral state reconstruction models for estimating Salmonella transmission during outbreaks S Bloomfield, T Vaughan, J Benschop, J Marshall, D Hayman, P Biggs, ... BioRxiv, 574087, 2019 | 6 | 2019 |
Comparative genomics of Campylobacter jejuni from clinical campylobacteriosis stool specimens B Djeghout, SJ Bloomfield, S Rudder, N Elumogo, AE Mather, J Wain, ... Gut Pathogens 14 (1), 45, 2022 | 4 | 2022 |
Genomic characterization of Pseudomonas spp. on food: implications for spoilage, antimicrobial resistance and human infection SJ Bloomfield, R Palau, ER Holden, MA Webber, AE Mather BMC microbiology 24 (1), 20, 2024 | 3 | 2024 |
Genomic diversity and epidemiological significance of non-typhoidal Salmonella found in retail food collected in Norfolk, UK SJ Bloomfield, N Janecko, R Palau, NF Alikhan, AE Mather Microbial Genomics 9 (7), 001075, 2023 | 2 | 2023 |
Tatajuba: exploring the distribution of homopolymer tracts L de Oliveira Martins, S Bloomfield, E Stoakes, AJ Grant, AJ Page, ... NAR Genomics and Bioinformatics 4 (1), lqac003, 2022 | 2 | 2022 |
Genomic and phenotypic comparison of two Salmonella Typhimurium strains responsible for consecutive salmonellosis outbreaks in New Zealand SJ Bloomfield, J Benschop, AC Midwinter, PJ Biggs, JC Marshall, ... International Journal of Medical Microbiology 311 (7), 151534, 2021 | 2 | 2021 |
Draft Whole-Genome Sequences of Three Isolates of a Novel Strain of a Campylobacter sp. Isolated from New Zealand Birds and Water DA Wilkinson, AC Midwinter, E Kwan, SJ Bloomfield, NP French, PJ Biggs Microbiology Resource Announcements 8 (18), 10.1128/mra. 00258-19, 2019 | 2 | 2019 |
Yersinia enterocolitica biovar 1A: An underappreciated potential pathogen in the food chain R Palau, SJ Bloomfield, C Jenkins, DR Greig, F Jorgensen, AE Mather International Journal of Food Microbiology 412, 110554, 2024 | 1 | 2024 |
Extensive epigenetic modification with large-scale chromosomal and plasmid recombination characterise the Legionella longbeachae serogroup 1 genome S Slow, T Anderson, DR Murdoch, S Bloomfield, D Winter, PJ Biggs Scientific Reports 12 (1), 5810, 2022 | 1 | 2022 |