Change-O: a toolkit for analyzing large-scale B cell immunoglobulin repertoire sequencing data NT Gupta, JA Vander Heiden, M Uduman, D Gadala-Maria, G Yaari, ... Bioinformatics 31 (20), 3356-3358, 2015 | 685 | 2015 |
Models of somatic hypermutation targeting and substitution based on synonymous mutations from high-throughput immunoglobulin sequencing data G Yaari, JA Vander Heiden, M Uduman, D Gadala-Maria, N Gupta, ... Frontiers in immunology 4, 358, 2013 | 245 | 2013 |
Automated analysis of high-throughput B-cell sequencing data reveals a high frequency of novel immunoglobulin V gene segment alleles D Gadala-Maria, G Yaari, M Uduman, SH Kleinstein Proceedings of the National Academy of Sciences 112 (8), E862-E870, 2015 | 222 | 2015 |
High-resolution antibody dynamics of vaccine-induced immune responses U Laserson, F Vigneault, D Gadala-Maria, G Yaari, M Uduman, ... Proceedings of the National Academy of Sciences 111 (13), 4928-4933, 2014 | 203 | 2014 |
Individual heritable differences result in unique cell lymphocyte receptor repertoires of naïve and antigen-experienced cells F Rubelt, CR Bolen, HM McGuire, JAV Heiden, D Gadala-Maria, M Levin, ... Nature communications 7 (1), 1-12, 2016 | 119 | 2016 |
Identification of subject-specific immunoglobulin alleles from expressed repertoire sequencing data D Gadala-Maria, M Gidoni, S Marquez, JA Vander Heiden, JT Kos, ... Frontiers in immunology 10, 129, 2019 | 63 | 2019 |
A New System for Comparative Functional Genomics of Saccharomyces Yeasts AA Caudy, Y Guan, Y Jia, C Hansen, C DeSevo, AP Hayes, J Agee, ... Genetics 195 (1), 275-287, 2013 | 36 | 2013 |
Individual heritable differences result in unique cell lymphocyte receptor repertoires of naïve and antigen-experienced cells. Nat Commun. 2016; 7: 11112 F Rubelt, CR Bolen, HM McGuire, JA Vander Heiden, D Gadala-Maria, ... Epub 2016/03/24. doi: 10.1038/ncomms11112. PubMed PMID: 27005435, 0 | 5 | |
Computational discovery of immunoglobulin genotypes from high-throughput B-cell receptor sequencing data DF Gadala-Maria Yale University, 2017 | | 2017 |
Distinctive differences in lymphocyte receptor repertoire and in cell frequencies results in an individual immune system F Rubelt, CR Bolen, J Vander Heiden, MH McGuire, D Gadala-Maria, ... EUROPEAN JOURNAL OF IMMUNOLOGY 46, 54-55, 2016 | | 2016 |
Package ‘alakazam’ J Vander Heiden, N Gupta, MJA Vander Heiden | | 2015 |