Accurate detection of m6A RNA modifications in native RNA sequences H Liu, O Begik, MC Lucas, JM Ramirez, CE Mason, D Wiener, S Schwartz, ... Nature communications 10 (1), 4079, 2019 | 396 | 2019 |
Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis H Liu, TG Stephens, RA González-Pech, VH Beltran, B Lapeyre, ... Communications biology 1 (1), 95, 2018 | 200 | 2018 |
Quantitative profiling of pseudouridylation dynamics in native RNAs with nanopore sequencing O Begik, MC Lucas, LP Pryszcz, JM Ramirez, R Medina, I Milenkovic, ... Nature biotechnology 39 (10), 1278-1291, 2021 | 191 | 2021 |
Genomic evidence for the parallel evolution of coastal forms in the Senecio lautus complex F Roda, L Ambrose, GM Walter, HL Liu, A Schaul, A Lowe, PB Pelser, ... Molecular ecology 22 (11), 2941-2952, 2013 | 129 | 2013 |
Convergence and divergence during the adaptation to similar environments by an Australian groundsel F Roda, H Liu, MJ Wilkinson, GM Walter, ME James, DM Bernal, MC Melo, ... Evolution 67 (9), 2515-2529, 2013 | 81 | 2013 |
Integrative analyses of the RNA modification machinery reveal tissue-and cancer-specific signatures O Begik, MC Lucas, H Liu, JM Ramirez, JS Mattick, EM Novoa Genome biology 21, 1-24, 2020 | 66 | 2020 |
Evolutionary origins of a bioactive peptide buried within preproalbumin AG Elliott, C Delay, H Liu, Z Phua, KJ Rosengren, AH Benfield, JL Panero, ... The Plant Cell 26 (3), 981-995, 2014 | 61 | 2014 |
Molecular barcoding of native RNAs using nanopore sequencing and deep learning MA Smith, T Ersavas, JM Ferguson, H Liu, MC Lucas, O Begik, L Bojarski, ... Genome research 30 (9), 1345-1353, 2020 | 55 | 2020 |
MasterOfPores: a workflow for the analysis of oxford nanopore direct RNA sequencing datasets L Cozzuto, H Liu, LP Pryszcz, TH Pulido, A Delgado-Tejedor, ... Frontiers in genetics 11, 211, 2020 | 49 | 2020 |
EpiNano: Detection of m6A RNA Modifications Using Oxford Nanopore Direct RNA Sequencing H Liu, O Begik, EM Novoa RNA Modifications: Methods and Protocols, 31-52, 2021 | 48 | 2021 |
Interspecific pollen transfer between two coflowering species was minimized by bumblebee fidelity and differential pollen placement on the bumblebee body ZH Huang, HL Liu, SQ Huang Journal of Plant Ecology 8 (2), 109-115, 2015 | 45 | 2015 |
Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing O Begik, G Diensthuber, H Liu, A Delgado-Tejedor, C Kontur, AM Niazi, ... Nature Methods 20 (1), 75-85, 2023 | 23 | 2023 |
Phenotypic and genotypic parallel evolution in parapatric ecotypes of Senecio ME James, MJ Wilkinson, DM Bernal, H Liu, HL North, J Engelstädter, ... Evolution 75 (12), 3115-3131, 2021 | 23 | 2021 |
Subcellular relocalization and nuclear redistribution of the RNA methyltransferases TRMT1 and TRMT1L upon neuronal activation N Jonkhout, S Cruciani, HG Santos Vieira, J Tran, H Liu, G Liu, R Pickford, ... RNA biology 18 (11), 1905-1919, 2021 | 16 | 2021 |
Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis. Communications Biology, 1 (1), 95 H Liu, TG Stephens, RA González-Pech, VH Beltran, B Lapeyre, ... | 16 | 2018 |
Accurate detection of m6A RNA modifications in native RNA sequences. Nat Commun 10: 4079 H Liu, O Begik, MC Lucas, JM Ramirez, CE Mason, D Wiener, S Schwartz, ... | 11 | 2019 |
Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis. Commun Biol. 2018; 1: 95 H Liu, TG Stephens, RA González-Pech, VH Beltran, B Lapeyre, ... Frontiers in microbiology 9, 228, 2018 | 9 | 2018 |
Quantitative profiling of native RNA modifications and their dynamics using nanopore sequencing O Begik, MC Lucas, LP Pryszcz, JM Ramirez, R Medina, I Milenkovic, ... bioRxiv, 2020.07. 06.189969, 2020 | 6 | 2020 |
Divergence in hormone signalling links local adaptation and hybrid failure MC Wilkinson, F Roda, GM Walter, ME James, R Nipper, J Walsh, H Liu, ... BioRxiv, 845354, 2019 | 5 | 2019 |
Developing genomic resources for an emerging ecological model species Senecio lautus H Liu | 4 | 2015 |