In vivo Polycomb kinetics and mitotic chromatin binding distinguish stem cells from differentiated cells JP Fonseca, PA Steffen, S Müller, J Lu, A Sawicka, C Seiser, L Ringrose Genes & development 26 (8), 857-871, 2012 | 80 | 2012 |
The maize mid-complementing activity homolog cell number regulator13/narrow odd dwarf coordinates organ growth and tissue patterning M Rosa, MJ Abraham-Juárez, MW Lewis, JP Fonseca, W Tian, V Ramirez, ... The Plant Cell 29 (3), 474-490, 2017 | 62 | 2017 |
A toolkit for rapid modular construction of biological circuits in mammalian cells JP Fonseca, AR Bonny, GR Kumar, AH Ng, J Town, QC Wu, E Aslankoohi, ... ACS synthetic biology 8 (11), 2593-2606, 2019 | 56 | 2019 |
Quantitative in vivo analysis of chromatin binding of Polycomb and Trithorax group proteins reveals retention of ASH1 on mitotic chromatin PA Steffen, JP Fonseca, C Gänger, E Dworschak, T Kockmann, C Beisel, ... Nucleic Acids Research, 2013 | 48 | 2013 |
Epigenetics meets mathematics: towards a quantitative understanding of chromatin biology PA Steffen, JP Fonseca, L Ringrose Bioessays 34 (10), 901-913, 2012 | 42 | 2012 |
Orthogonal control of mean and variability of endogenous genes in a human cell line AR Bonny, JP Fonseca, JE Park, H El-Samad Nature Communications 12 (1), 292, 2021 | 15 | 2021 |
Analysis of localized cAMP perturbations within a tissue reveal the effects of a local, dynamic gap junction state on ERK signaling JP Fonseca, E Aslankoohi, AH Ng, M Chevalier PLOS Computational Biology 18 (3), e1009873, 2022 | 4 | 2022 |
Assembly of genetic circuits with the mammalian toolKit JP Fonseca, AR Bonny, J Town, H El-Samad Bio-protocol 10 (5), e3547-e3547, 2020 | 4 | 2020 |
Biphasic Response of Protein Kinase A to Cyclic Adenosine Monophosphate Triggers Distinct Epithelial Phenotypes JP Fonseca, ZY Weinberg, E Aslankoohi, H El-Samad bioRxiv, 747030, 2019 | 1 | 2019 |
TuNR: Orthogonal Control of Mean and Variability of Endogenous Genes in a Human Cell Line AR Bonny, JP Fonseca, JE Park, H El-Samad bioRxiv, 2020.05. 23.112979, 2020 | | 2020 |
PDE-constrained optimization for estimating population dynamics over cell cycle from static single cell measurements K Kuritz, AR Bonny, JP Fonseca, F Allgöwer bioRxiv, 2020.03. 30.015909, 2020 | | 2020 |