Transcriptional profiles of the human pathogenic fungus Paracoccidioides brasiliensis in mycelium and yeast cells MSS Felipe, RV Andrade, FBM Arraes, AM Nicola, AQ Maranhao, ... Journal of Biological Chemistry 280 (26), 24706-24714, 2005 | 210 | 2005 |
Comparative genomic analysis of human fungal pathogens causing paracoccidioidomycosis CA Desjardins, MD Champion, JW Holder, A Muszewska, J Goldberg, ... PLoS genetics 7 (10), e1002345, 2011 | 203 | 2011 |
Transcriptome characterization of the dimorphic and pathogenic fungus Paracoccidioides brasiliensis by EST analysis MSS Felipe, RV Andrade, SS Petrofeza, AQ Maranhão, FAG Torres, ... Yeast 20 (3), 263-271, 2003 | 136 | 2003 |
Reversal and transposition distance of linear chromosomes MEMT Walter, Z Dias, J Meidanis Proceedings. String Processing and Information Retrieval: A South American …, 1998 | 133 | 1998 |
Guarana (Paullinia cupana var. sorbilis), an anciently consumed stimulant from the Amazon rain forest: the seeded-fruit transcriptome PCS Ângelo, CG Nunes-Silva, MM Brígido, JSN Azevedo, EN Assunção, ... Plant cell reports 27, 117-124, 2008 | 84 | 2008 |
Transcriptome analysis of the Amazonian viper Bothrops atrox venom gland using expressed sequence tags (ESTs) M Neiva, FBM Arraes, JV de Souza, G Radis-Baptista, ARBP da Silva, ... Toxicon 53 (4), 427-436, 2009 | 65 | 2009 |
A support vector machine based method to distinguish long non-coding RNAs from protein coding transcripts HW Schneider, T Raiol, MM Brigido, MEMT Walter, PF Stadler BMC genomics 18, 1-14, 2017 | 57 | 2017 |
Reversal distance of signed circular chromosomes J Meidanis, M Walter, Z Dias Relatório Técnico IC-00-23, Institute of Computing, University of Campinas …, 2000 | 53 | 2000 |
A new approach for approximating the transposition distance MEMT Walter, Z Dias, J Meidanis Proceedings Seventh International Symposium on String Processing and …, 2000 | 49 | 2000 |
Transposition distance between a permutation and its reverse J Meidanis, M Walter, Z Dias Proceedings of the 4th South American Workshop on String Processing (WSP’97 …, 1997 | 40 | 1997 |
Evaluating the cassandra NoSQL database approach for genomic data persistency R Aniceto, R Xavier, V Guimarães, F Hondo, M Holanda, ME Walter, ... International journal of genomics 2015 (1), 502795, 2015 | 38 | 2015 |
Parallel strategies for local biological sequence alignment in a cluster of workstations A Boukerche, ACMA de Melo, M Ayala-Rincón 19th IEEE International Parallel and Distributed Processing Symposium, 8 pp., 2005 | 38 | 2005 |
A study of genomic data provenance in NoSQL document-oriented database systems V Guimaraes, F Hondo, R Almeida, H Vera, M Holanda, A Araujo, ... 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2015 | 34 | 2015 |
Provenance in bioinformatics workflows R de Paula, M Holanda, LSA Gomes, S Lifschitz, MEMT Walter BMC bioinformatics 14 (Suppl 11), S6, 2013 | 31 | 2013 |
Working on the problem of sorting by transpositions on genome rearrangements MEMT Walter, LRAF Curado, AG Oliveira Combinatorial Pattern Matching: 14th Annual Symposium, CPM 2003 Morelia …, 2003 | 31 | 2003 |
SnoReport 2.0: new features and a refined Support Vector Machine to improve snoRNA identification JV de Araujo Oliveira, F Costa, R Backofen, PF Stadler, ... BMC bioinformatics 17, 73-86, 2016 | 26 | 2016 |
Comparing two long biological sequences using a dsm system RCF Melo, MET Walter, ACMA Melo, R Batista, M Nardelli, T Martins, ... Euro-Par 2003 Parallel Processing: 9th International Euro-Par Conference …, 2003 | 24 | 2003 |
PlantRNA_Sniffer: a SVM-based workflow to predict long intergenic non-coding RNAs in plants LM Vieira, C Grativol, F Thiebaut, TG Carvalho, PR Hardoim, A Hemerly, ... Non-coding RNA 3 (1), 11, 2017 | 23 | 2017 |
Towards a hybrid federated cloud platform to efficiently execute bioinformatics workflows H Saldanha, E Ribeiro, C Borges, A Araújo, R Gallon, M Holanda, ... BioInformatics, 107-132, 2012 | 21 | 2012 |
Live neighbor-joining GP Telles, GS Araújo, MEMT Walter, MM Brigido, NF Almeida BMC bioinformatics 19, 1-13, 2018 | 20 | 2018 |