Characterization of cereal toxicity for celiac disease patients based on protein homology in grains LW Vader, DT Stepniak, EM Bunnik, YMC Kooy, W De Haan, JW Drijfhout, ... Gastroenterology 125 (4), 1105-1113, 2003 | 345 | 2003 |
Autologous neutralizing humoral immunity and evolution of the viral envelope in the course of subtype B human immunodeficiency virus type 1 infection EM Bunnik, L Pisas, AC Van Nuenen, H Schuitemaker Journal of virology 82 (16), 7932-7941, 2008 | 243 | 2008 |
Three-dimensional modeling of the P. falciparum genome during the erythrocytic cycle reveals a strong connection between genome architecture and gene expression F Ay, EM Bunnik, N Varoquaux, SM Bol, J Prudhomme, JP Vert, WS Noble, ... Genome research 24 (6), 974-988, 2014 | 242 | 2014 |
Cross-reactive neutralizing humoral immunity does not protect from HIV type 1 disease progression Z Euler, MJ van Gils, EM Bunnik, P Phung, B Schweighardt, T Wrin, ... The Journal of infectious diseases 201 (7), 1045-1053, 2010 | 229 | 2010 |
Polysome profiling reveals translational control of gene expression in the human malaria parasite Plasmodium falciparum EM Bunnik, DWD Chung, M Hamilton, N Ponts, A Saraf, J Prudhomme, ... Genome biology 14, 1-18, 2013 | 152 | 2013 |
Adaptation of HIV-1 envelope gp120 to humoral immunity at a population level EM Bunnik, Z Euler, MRA Welkers, BDM Boeser-Nunnink, ML Grijsen, ... Nature medicine 16 (9), 995-997, 2010 | 143 | 2010 |
Longer V1V2 region with increased number of potential N-linked glycosylation sites in the HIV-1 envelope glycoprotein protects against HIV-specific neutralizing antibodies MJ van Gils, EM Bunnik, BD Boeser-Nunnink, JA Burger, M Terlouw-Klein, ... Journal of virology 85 (14), 6986-6995, 2011 | 113 | 2011 |
The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum EM Bunnik, G Batugedara, A Saraf, J Prudhomme, L Florens, KG Le Roch Genome biology 17, 1-18, 2016 | 108 | 2016 |
Changes in genome organization of parasite-specific gene families during the Plasmodium transmission stages EM Bunnik, KB Cook, N Varoquaux, G Batugedara, J Prudhomme, A Cort, ... Nature communications 9 (1), 1910, 2018 | 106 | 2018 |
Genome-wide mapping of DNA methylation in the human malaria parasite Plasmodium falciparum N Ponts, L Fu, EY Harris, J Zhang, DWD Chung, MC Cervantes, ... Cell host & microbe 14 (6), 696-706, 2013 | 102 | 2013 |
Rapid escape from preserved cross-reactive neutralizing humoral immunity without loss of viral fitness in HIV-1-infected progressors and long-term nonprogressors MJ Van Gils, EM Bunnik, JA Burger, Y Jacob, B Schweighardt, T Wrin, ... Journal of virology 84 (7), 3576-3585, 2010 | 102 | 2010 |
An introduction to functional genomics and systems biology EM Bunnik, KG Le Roch Advances in wound care 2 (9), 490-498, 2013 | 95 | 2013 |
Responsiveness of cats (Felidae) to silver vine (Actinidia polygama), Tatarian honeysuckle (Lonicera tatarica), valerian (Valeriana officinalis) and catnip (Nepeta cataria) S Bol, J Caspers, L Buckingham, GD Anderson-Shelton, C Ridgway, ... BMC veterinary research 13, 1-16, 2017 | 94 | 2017 |
The multifunctional autophagy pathway in the human malaria parasite, Plasmodium falciparum S Cervantes, EM Bunnik, A Saraf, CM Conner, A Escalante, ME Sardiu, ... Autophagy 10 (1), 80-92, 2014 | 83 | 2014 |
Detection of inferred CCR5-and CXCR4-using HIV-1 variants and evolutionary intermediates using ultra-deep pyrosequencing EM Bunnik, LC Swenson, D Edo-Matas, W Huang, W Dong, A Frantzell, ... PLoS pathogens 7 (6), e1002106, 2011 | 82 | 2011 |
Activity of broadly neutralizing antibodies, including PG9, PG16, and VRC01, against recently transmitted subtype B HIV-1 variants from early and late in the epidemic Z Euler, EM Bunnik, JA Burger, BDM Boeser-Nunnink, ML Grijsen, ... Journal of virology 85 (14), 7236-7245, 2011 | 80 | 2011 |
Naturally Acquired Humoral Immunity Against Plasmodium falciparum Malaria SJ Gonzales, RA Reyes, AE Braddom, G Batugedara, S Bol, EM Bunnik Frontiers in immunology 11, 594653, 2020 | 79 | 2020 |
Multiple dimensions of epigenetic gene regulation in the malaria parasite Plasmodium falciparum Gene regulation via histone modifications, nucleosome positioning and … F Ay, EM Bunnik, N Varoquaux, JP Vert, WS Noble, KG Le Roch Bioessays 37 (2), 182-194, 2015 | 78 | 2015 |
Comparative 3D genome organization in apicomplexan parasites EM Bunnik, A Venkat, J Shao, KE McGovern, G Batugedara, D Worth, ... Proceedings of the National Academy of Sciences 116 (8), 3183-3192, 2019 | 77 | 2019 |
Nascent RNA sequencing reveals mechanisms of gene regulation in the human malaria parasite Plasmodium falciparum XM Lu, G Batugedara, M Lee, J Prudhomme, EM Bunnik, KG Le Roch Nucleic acids research 45 (13), 7825-7840, 2017 | 76 | 2017 |