Integrated proteogenomic characterization of human high-grade serous ovarian cancer H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ... Cell 166 (3), 755-765, 2016 | 917 | 2016 |
A multidimensional chromatography technology for in-depth phosphoproteome analysis CP Albuquerque, MB Smolka, SH Payne, V Bafna, J Eng, H Zhou Molecular & Cellular Proteomics 7 (7), 1389-1396, 2008 | 658 | 2008 |
Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ... Cell 177 (4), 1035-1049. e19, 2019 | 588 | 2019 |
Integrated proteogenomic characterization of clear cell renal cell carcinoma DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ... Cell 179 (4), 964-983. e31, 2019 | 512 | 2019 |
Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ... Cell 182 (1), 200-225. e35, 2020 | 482 | 2020 |
Proteogenomic and metabolomic characterization of human glioblastoma LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ... Cancer cell 39 (4), 509-528. e20, 2021 | 408 | 2021 |
Proteogenomic characterization of endometrial carcinoma Y Dou, EA Kawaler, DC Zhou, MA Gritsenko, C Huang, L Blumenberg, ... Cell 180 (4), 729-748. e26, 2020 | 340 | 2020 |
Proteogenomic landscape of breast cancer tumorigenesis and targeted therapy K Krug, EJ Jaehnig, S Satpathy, L Blumenberg, A Karpova, M Anurag, ... Cell 183 (5), 1436-1456. e31, 2020 | 330 | 2020 |
Discovery and revision of Arabidopsis genes by proteogenomics NE Castellana, SH Payne, Z Shen, M Stanke, V Bafna, SP Briggs Proceedings of the national academy of sciences 105 (52), 21034-21038, 2008 | 319 | 2008 |
Proteogenomic characterization of pancreatic ductal adenocarcinoma L Cao, C Huang, DC Zhou, Y Hu, TM Lih, SR Savage, K Krug, DJ Clark, ... Cell 184 (19), 5031-5052. e26, 2021 | 291 | 2021 |
Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma C Huang, L Chen, SR Savage, RV Eguez, Y Dou, Y Li, ... Cancer cell 39 (3), 361-379. e16, 2021 | 228 | 2021 |
Systematic analysis of splice-site-creating mutations in cancer RG Jayasinghe, S Cao, Q Gao, MC Wendl, NS Vo, SM Reynolds, Y Zhao, ... Cell reports 23 (1), 270-281. e3, 2018 | 226 | 2018 |
A proteogenomic portrait of lung squamous cell carcinoma S Satpathy, K Krug, PMJ Beltran, SR Savage, F Petralia, C Kumar-Sinha, ... Cell 184 (16), 4348-4371. e40, 2021 | 210 | 2021 |
Identification and quantification of proteoforms by mass spectrometry LV Schaffer, RJ Millikin, RM Miller, LC Anderson, RT Fellers, Y Ge, ... Proteomics 19 (10), 1800361, 2019 | 207 | 2019 |
The utility of protein and mRNA correlation SH Payne Trends in biochemical sciences 40 (1), 1-3, 2015 | 202 | 2015 |
PECAN: library-free peptide detection for data-independent acquisition tandem mass spectrometry data YS Ting, JD Egertson, JG Bollinger, BC Searle, SH Payne, WS Noble, ... Nature methods 14 (9), 903-908, 2017 | 200 | 2017 |
A structural examination and collision cross section database for over 500 metabolites and xenobiotics using drift tube ion mobility spectrometry X Zheng, NA Aly, Y Zhou, KT Dupuis, A Bilbao, VL Paurus, DJ Orton, ... Chemical science 8 (11), 7724-7736, 2017 | 192 | 2017 |
Peptide-centric proteome analysis: an alternative strategy for the analysis of tandem mass spectrometry data YS Ting, JD Egertson, SH Payne, S Kim, B MacLean, L Käll, R Aebersold, ... Molecular & Cellular Proteomics 14 (9), 2301-2307, 2015 | 178 | 2015 |
Retention and loss of amino acid biosynthetic pathways based on analysis of whole-genome sequences SH Payne, WF Loomis Eukaryotic cell 5 (2), 272-276, 2006 | 160 | 2006 |
Methods, tools and current perspectives in proteogenomics KV Ruggles, K Krug, X Wang, KR Clauser, J Wang, SH Payne, D Fenyö, ... Molecular & Cellular Proteomics 16 (6), 959-981, 2017 | 157 | 2017 |