Simulation and inference algorithms for stochastic biochemical reaction networks: from basic concepts to state-of-the-art DJ Warne, RE Baker, MJ Simpson Journal of the Royal Society Interface 16 (151), 20180943, 2019 | 89 | 2019 |
Identifiability analysis for stochastic differential equation models in systems biology AP Browning, DJ Warne, K Burrage, RE Baker, MJ Simpson Journal of the Royal Society Interface 17 (173), 20200652, 2020 | 85 | 2020 |
CAD/CAM-assisted breast reconstruction F Melchels, PS Wiggenhauser, D Warne, M Barry, FR Ong, WS Chong, ... Biofabrication 3 (3), 034114, 2011 | 79 | 2011 |
Using experimental data and information criteria to guide model selection for reaction–diffusion problems in mathematical biology DJ Warne, RE Baker, MJ Simpson Bulletin of Mathematical Biology 81 (6), 1760-1804, 2019 | 74 | 2019 |
Utility of genetic algorithms for solving large-scale construction time-cost trade-off problems D Agdas, DJ Warne, J Osio-Norgaard, FJ Masters Journal of Computing in Civil Engineering 32 (1), 04017072, 2018 | 63 | 2018 |
Parameter identifiability and model selection for sigmoid population growth models MJ Simpson, AP Browning, DJ Warne, OJ Maclaren, RE Baker Journal of theoretical biology 535, 110998, 2022 | 51 | 2022 |
Multilevel rejection sampling for approximate Bayesian computation DJ Warne, RE Baker, MJ Simpson Computational Statistics & Data Analysis 124, 71-86, 2018 | 36 | 2018 |
Optimal quantification of contact inhibition in cell populations DJ Warne, RE Baker, MJ Simpson Biophysical Journal 113 (9), 1920-1924, 2017 | 36 | 2017 |
A practical guide to pseudo-marginal methods for computational inference in systems biology DJ Warne, RE Baker, MJ Simpson Journal of theoretical biology 496, 110255, 2020 | 26 | 2020 |
Hindsight is 2020 vision: a characterisation of the global response to the COVID-19 pandemic DJ Warne, A Ebert, C Drovandi, W Hu, A Mira, K Mengersen BMC public health 20, 1-14, 2020 | 24 | 2020 |
Comparison of high level FPGA hardware design for solving tri-diagonal linear systems DJ Warne, NA Kelson, RF Hayward Procedia Computer Science 29, 95-101, 2014 | 24 | 2014 |
Rapid Bayesian inference for expensive stochastic models DJ Warne, RE Baker, MJ Simpson Journal of Computational and Graphical Statistics, 2021 | 15 | 2021 |
Computationally efficient framework for diagnosing, understanding and predicting biphasic population growth RJ Murphy, OJ Maclaren, AR Calabrese, PB Thomas, DJ Warne, ... Journal of the Royal Society Interface 19 (197), 20220560, 2022 | 13 | 2022 |
Multifidelity multilevel Monte Carlo to accelerate approximate Bayesian parameter inference for partially observed stochastic processes DJ Warne, TP Prescott, RE Baker, MJ Simpson Journal of Computational Physics 469, 111543, 2022 | 12 | 2022 |
Misspecification-robust Sequential Neural Likelihood for Simulation-based Inference RP Kelly, DJ Nott, DT Frazier, DJ Warne, C Drovandi Transactions on Machine Learning Research, 2024 | 11* | 2024 |
Identification of two‐phase recovery for interpretation of coral reef monitoring data DJ Warne, KA Crossman, W Jin, K Mengersen, K Osborne, MJ Simpson, ... Journal of Applied Ecology, 2021 | 10 | 2021 |
Solving tri-diagonal linear systems using field programmable gate arrays D Warne, N Kelson, R Hayward Proceedings of the 4th International Conference on Computational Methods, 1-8, 2012 | 10 | 2012 |
Vector operations for accelerating expensive Bayesian computations–a tutorial guide DJ Warne, SA Sisson, C Drovandi Bayesian Analysis 17 (2), 593-622, 2022 | 7* | 2022 |
Image-based flow visualisation (IBFV) to enhance interpretation of complex flow patterns within a shallow tidal barrier estuary DJ Warne, G Larsen, J Young, ME Cox Environmental modelling & software 47, 64-73, 2013 | 7 | 2013 |
Calibration of Agent Based Models for Monophasic and Biphasic Tumour Growth using Approximate Bayesian Computation X Wang, AL Jenner, R Salomone, DJ Warne, C Drovandi Journal of Mathematical Biology, 2024 | 6* | 2024 |