Exon-Capture-Based Phylogeny and Diversification of the Venomous Gastropods (Neogastropoda, Conoidea) J Abdelkrim, L Aznar-Cormano, AE Fedosov, YI Kantor, P Lozouet, ... Molecular biology and evolution 35 (10), 2355-2374, 2018 | 62 | 2018 |
Modern drought conditions in western Sahel unprecedented in the past 1600 years M Carré, M Azzoug, P Zaharias, A Camara, R Cheddadi, M Chevalier, ... Climate Dynamics 52, 1949-1964, 2019 | 33 | 2019 |
DISCO: Species tree inference using multicopy gene family tree decomposition J Willson, MS Roddur, B Liu, P Zaharias, T Warnow Systematic Biology 71 (3), 610-629, 2022 | 28 | 2022 |
Delimiting species of marine gastropods (Turridae, Conoidea) using RAD‐sequencing in an integrative taxonomy framework J Abdelkrim, L Aznar‐Cormano, B Buge, A Fedosov, Y Kantor, P Zaharias, ... Molecular ecology, 2018 | 24 | 2018 |
Venom Diversity and Evolution in the Most Divergent Cone Snail Genus Profundiconus G Fassio, MV Modica, L Mary, P Zaharias, AE Fedosov, J Gorson, ... Toxins 11 (11), 623, 2019 | 21* | 2019 |
Data, Time and Money: Evaluating the Best Compromise for Inferring Molecular Phylogenies of Non-Model Animal Taxa P Zaharias, E Pante, D Gey, A Fedosov, N Puillandre Molecular phylogenetics and evolution 142, 106660, 2020 | 19 | 2020 |
A quest for the lost types of Lophiotoma (Gastropoda: Conoidea: Turridae): integrative taxonomy in a nomenclatural mess N Puillandre, AE Fedosov, P Zaharias, L Aznar-Cormano, YI Kantor Zoological Journal of the Linnean Society 181 (2), 243-271, 2017 | 18 | 2017 |
MAGUS+ eHMMs: improved multiple sequence alignment accuracy for fragmentary sequences C Shen, P Zaharias, T Warnow Bioinformatics 38 (4), 918-924, 2022 | 15 | 2022 |
Re-evaluating deep neural networks for phylogeny estimation: the issue of taxon sampling P Zaharias, M Grosshauser, T Warnow Journal of Computational Biology 29 (1), 74-89, 2022 | 15 | 2022 |
Just the once will not hurt: DNA suggests species lumping over two oceans in deep-sea snails (Cryptogemma) P Zaharias, YI Kantor, AE Fedosov, F Criscione, A Hallan, Y Kano, ... Zoological Journal of the Linnean Society 190 (2), 532-557, 2020 | 14 | 2020 |
Neogastropod (Mollusca, Gastropoda) phylogeny: A step forward with mitogenomes T Lemarcis, AE Fedosov, YI Kantor, J Abdelkrim, P Zaharias, N Puillandre Zoologica Scripta, 2022 | 10 | 2022 |
Every hooked beak is maintained by a prey: ecological signal in cephalopod beak shape M Roscian, A Herrel, P Zaharias, R Cornette, V Fernandez, I Kruta, ... Functional Ecology, 2022 | 10 | 2022 |
A phylogeny-aware approach reveals unexpected venom components in divergent lineages of cone snails A Fedosov, P Zaharias, N Puillandre Proceedings of the Royal Society B 288 (1954), 20211017, 2021 | 8 | 2021 |
Disjoint Tree Mergers for Large-Scale Maximum Likelihood Tree Estimation M Park, P Zaharias, T Warnow Algorithms 14 (5), 148, 2021 | 6 | 2021 |
Recent progress on methods for estimating and updating large phylogenies P Zaharias, T Warnow Philosophical Transactions of the Royal Society B 377 (1861), 20210244, 2022 | 5 | 2022 |
The maximum weight trace alignment merging problem P Zaharias, V Smirnov, T Warnow Algorithms for Computational Biology: 8th International Conference, AlCoB …, 2021 | 4 | 2021 |
Robustness of Felsenstein's versus Transfer Bootstrap Supports with respect to Taxon Sampling P Zaharias, F Lemoine, O Gascuel Systematic Biology, 2023 | 2 | 2023 |
Large-scale multiple sequence alignment and the maximum weight trace alignment merging problem P Zaharias, V Smirnov, T Warnow IEEE/ACM Transactions on Computational Biology and Bioinformatics 20 (3 …, 2022 | 2 | 2022 |
Coupling DNA barcodes and exon-capture to resolve the phylogeny of Turridae (Gastropoda, Conoidea) P Zaharias, YI Kantor, AE Fedosov, N Puillandre Molecular Phylogenetics and Evolution 191, 107969, 2024 | 1 | 2024 |
Accurate large-scale phylogeny-aware alignment using BAli-Phy M Gupta, P Zaharias, T Warnow Bioinformatics 37 (24), 4677-4683, 2021 | 1 | 2021 |