Bioconda: sustainable and comprehensive software distribution for the life sciences B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ... Nature methods 15 (7), 475-476, 2018 | 853 | 2018 |
GOATOOLS: A Python library for Gene Ontology analyses DV Klopfenstein, L Zhang, BS Pedersen, F Ramírez, A Warwick Vesztrocy, ... Scientific reports 8 (1), 1-17, 2018 | 807 | 2018 |
Transcriptome analysis of IL-10-stimulated (M2c) macrophages by next-generation sequencing EB Lurier, D Dalton, W Dampier, P Raman, S Nassiri, NM Ferraro, ... Immunobiology 222 (7), 847-856, 2017 | 184 | 2017 |
ChIP sequencing of cyclin D1 reveals a transcriptional role in chromosomal instability in mice MC Casimiro, M Crosariol, E Loro, A Ertel, Z Yu, W Dampier, EA Saria, ... The Journal of clinical investigation 122 (3), 833-843, 2012 | 137 | 2012 |
Prediction of HIV-1 virus-host protein interactions using virus and host sequence motifs P Evans, W Dampier, L Ungar, A Tozeren BMC medical genomics 2, 1-13, 2009 | 112 | 2009 |
Identification of common biological pathways and drug targets across multiple respiratory viruses based on human host gene expression analysis SB Smith, W Dampier, A Tozeren, JR Brown, M Magid-Slav PloS one 7 (3), e33174, 2012 | 95 | 2012 |
Gene editing of HIV-1 co-receptors to prevent and/or cure virus infection AG Allen, CH Chung, A Atkins, W Dampier, K Khalili, MR Nonnemacher, ... Frontiers in microbiology 9, 2940, 2018 | 72 | 2018 |
HIV excision utilizing CRISPR/Cas9 technology: attacking the proviral quasispecies in reservoirs to achieve a cure W Dampier, MR Nonnemacher, NT Sullivan, JM Jacobson, B Wigdahl MOJ immunology 1 (4), 2014 | 69 | 2014 |
Attenuation of Forkhead signaling by the retinal determination factor DACH1 J Zhou, C Wang, Z Wang, W Dampier, K Wu, MC Casimiro, I Chepelev, ... Proceedings of the National Academy of Sciences 107 (15), 6864-6869, 2010 | 67 | 2010 |
Bioinformatics analysis reveals transcriptome and microRNA signatures and drug repositioning targets for IBD and other autoimmune diseases PM Clark, N Dawany, W Dampier, SW Byers, RG Pestell, A Tozeren Inflammatory bowel diseases 18 (12), 2315-2333, 2012 | 59 | 2012 |
Off-target analysis in gene editing and applications for clinical translation of CRISPR/Cas9 in HIV-1 therapy A Atkins, CH Chung, AG Allen, W Dampier, TE Gurrola, IK Sariyer, ... Frontiers in genome editing 3, 673022, 2021 | 57 | 2021 |
Large‐scale integration of microarray data reveals genes and pathways common to multiple cancer types NB Dawany, WN Dampier, A Tozeren International Journal of Cancer 128 (12), 2881-2891, 2011 | 54 | 2011 |
Kinase-independent role of cyclin D1 in chromosomal instability and mammary tumorigenesis MC Casimiro, G Di Sante, M Crosariol, E Loro, W Dampier, A Ertel, Z Yu, ... Oncotarget 6 (11), 8525, 2015 | 51 | 2015 |
HIV-1 genetic variation resulting in the development of new quasispecies continues to be encountered in the peripheral blood of well-suppressed patients W Dampier, MR Nonnemacher, J Mell, J Earl, GD Ehrlich, V Pirrone, ... PloS one 11 (5), e0155382, 2016 | 50 | 2016 |
HIV-1 latency and eradication: past, present and future P K Datta, R Kaminski, W Hu, V Pirrone, N T Sullivan, M R Nonnemacher, ... Current HIV research 14 (5), 431-441, 2016 | 44 | 2016 |
Broad-spectrum and personalized guide RNAs for CRISPR/Cas9 HIV-1 therapeutics W Dampier, NT Sullivan, JC Mell, V Pirrone, GD Ehrlich, CH Chung, ... AIDS research and human retroviruses 34 (11), 950-960, 2018 | 38 | 2018 |
Designing broad-spectrum anti-HIV-1 gRNAs to target patient-derived variants W Dampier, NT Sullivan, CH Chung, JC Mell, MR Nonnemacher, ... Scientific reports 7 (1), 14413, 2017 | 37 | 2017 |
HIV protein sequence hotspots for crosstalk with host hub proteins M Sarmady, W Dampier, A Tozeren PLoS One 6 (8), e23293, 2011 | 37 | 2011 |
Immunomodulatory Effects of Human Cryopreserved Viable Amniotic Membrane in a Pro-Inflammatory Environment In Vitro CE Witherel, T Yu, M Concannon, W Dampier, KL Spiller Cellular and molecular bioengineering 10, 451-462, 2017 | 35 | 2017 |
Prediction potential of candidate biomarker sets identified and validated on gene expression data from multiple datasets M Gormley, W Dampier, A Ertel, B Karacali, A Tozeren BMC bioinformatics 8, 1-13, 2007 | 33 | 2007 |