| Multimodal single cell data integration challenge: results and lessons learned C Lance, MD Luecken, DB Burkhardt, R Cannoodt, P Rautenstrauch, ... BioRxiv, 2022.04. 11.487796, 2022 | 70 | 2022 |
| What should data science education do with large language models X Tu, J Zou, WJ Su, L Zhang arXiv preprint arXiv:2307.02792, 2023 | 40 | 2023 |
| Spatial-linked alignment tool (SLAT) for aligning heterogenous slices CR Xia, ZJ Cao, XM Tu, G Gao Nature Communications 14 (1), 7236, 2023 | 36* | 2023 |
| Expectation pooling: an effective and interpretable pooling method for predicting DNA–protein binding X Luo, X Tu, Y Ding, G Gao, M Deng Bioinformatics 36 (5), 1405-1412, 2020 | 35 | 2020 |
| Cross-Linked Unified Embedding for cross-modality representation learning X Tu, ZJ Cao, CR Xia, S Mostafavi, G Gao Advances in Neural Information Processing Systems 35, 15942-15955, 2022 | 27 | 2022 |
| An Evaluation of Large Language Models in Bioinformatics Research H Yin, Z Gu, F Wang, Y Abuduhaibaier, Y Zhu, X Tu, XS Hua, X Luo, ... arXiv preprint arXiv:2402.13714, 2024 | 9 | 2024 |
| Evaluation and optimization of sequence-based gene regulatory deep learning models AM Rafi, D Nogina, D Penzar, D Lee, D Lee, N Kim, S Kim, D Kim, Y Shin, ... bioRxiv, 2023.04. 26.538471, 2024 | 5 | 2024 |
| Identifying complex motifs in massive omics data with a variable-convolutional layer in deep neural network JY Li, S Jin, XM Tu, Y Ding, G Gao Briefings in Bioinformatics 22 (6), bbab233, 2021 | 5 | 2021 |
| A supervised contrastive framework for learning disentangled representations of cell perturbation data X Tu, JC Hütter, ZJ Wang, T Kudo, A Regev, R Lopez BioRxiv, 2024.01. 05.574421, 2024 | 4 | 2024 |
| An exact transformation for cnn kernel enables accurate sequence motif identification and leads to a potentially full probabilistic interpretation of cnn Y Ding, J Li, M Wang, X Tu, G Gao | 2 | 2017 |
| Contrasting genetic predisposition and diagnosis in psychiatric disorders: a multi-omic single-nucleus analysis of the human orbitofrontal cortex N Gerstner, AS Fröhlich, N Matosin, M Gagliardi, C Cruceanu, M Ködel, ... medRxiv, 2024.04. 24.24306179, 2024 | 1 | 2024 |
Zhi-Jie CaoPeking University在 mail.cbi.pku.edu.cn 的电子邮件经过验证
