Mapping human microbiome drug metabolism by gut bacteria and their genes M Zimmermann, M Zimmermann-Kogadeeva, R Wegmann, AL Goodman Nature 570 (7762), 462-467, 2019 | 862 | 2019 |
Discovery and characterization of gut microbiota decarboxylases that can produce the neurotransmitter tryptamine BB Williams, AH Van Benschoten, P Cimermancic, MS Donia, ... Cell host & microbe 16 (4), 495-503, 2014 | 579 | 2014 |
Separating host and microbiome contributions to drug pharmacokinetics and toxicity M Zimmermann, M Zimmermann-Kogadeeva, R Wegmann, AL Goodman Science 363 (6427), eaat9931, 2019 | 351 | 2019 |
Fumarate Reductase Activity Maintains an Energized Membrane in Anaerobic Mycobacterium tuberculosis S Watanabe, M Zimmermann, MB Goodwin, U Sauer, CE Barry 3rd, ... PLoS pathogens 7 (10), e1002287, 2011 | 256 | 2011 |
Absolute proteome composition and dynamics during dormancy and resuscitation of Mycobacterium tuberculosis OT Schubert, C Ludwig, M Kogadeeva, M Zimmermann, G Rosenberger, ... Cell host & microbe 18 (1), 96-108, 2015 | 229 | 2015 |
Bioaccumulation of therapeutic drugs by human gut bacteria M Klünemann, S Andrejev, S Blasche, A Mateus, P Phapale, ... Nature 597 (7877), 533-538, 2021 | 209 | 2021 |
Unravelling the collateral damage of antibiotics on gut bacteria L Maier, CV Goemans, J Wirbel, M Kuhn, C Eberl, M Pruteanu, P Müller, ... Nature 599 (7883), 120-124, 2021 | 208 | 2021 |
Engineered regulatory systems modulate gene expression of human commensals in the gut B Lim, M Zimmermann, NA Barry, AL Goodman Cell 169 (3), 547-558. e15, 2017 | 180 | 2017 |
Nontargeted metabolomics reveals the multilevel response to antibiotic perturbations M Zampieri, M Zimmermann, M Claassen, U Sauer Cell reports 19 (6), 1214-1228, 2017 | 159 | 2017 |
High coverage metabolomics analysis reveals phage-specific alterations to Pseudomonas aeruginosa physiology during infection J De Smet, M Zimmermann, M Kogadeeva, PJ Ceyssens, W Vermaelen, ... The ISME journal 10 (8), 1823-1835, 2016 | 149 | 2016 |
Antibodies set boundaries limiting microbial metabolite penetration and the resultant mammalian host response Y Uchimura, T Fuhrer, H Li, MA Lawson, M Zimmermann, B Yilmaz, ... Immunity 49 (3), 545-559. e5, 2018 | 139 | 2018 |
Next-Generation “-omics” Approaches Reveal a Massive Alteration of Host RNA Metabolism during Bacteriophage Infection of Pseudomonas aeruginosa A Chevallereau, BG Blasdel, J De Smet, M Monot, M Zimmermann, ... PLoS genetics 12 (7), e1006134, 2016 | 115 | 2016 |
Escherichia coli limits Salmonella Typhimurium infections after diet shifts and fat-mediated microbiota perturbation in mice SY Wotzka, M Kreuzer, L Maier, M Arnoldini, BD Nguyen, AO Brachmann, ... Nature Microbiology 4 (12), 2164-2174, 2019 | 114 | 2019 |
A family of pyrazinone natural products from a conserved nonribosomal peptide synthetase in Staphylococcus aureus M Zimmermann, MA Fischbach Chemistry & biology 17 (9), 925-930, 2010 | 108 | 2010 |
Integration of metabolomics and transcriptomics reveals a complex diet of Mycobacterium tuberculosis during early macrophage infection M Zimmermann, M Kogadeeva, M Gengenbacher, G McEwen, ... MSystems 2 (4), 10.1128/msystems. 00057-17, 2017 | 97 | 2017 |
PknG senses amino acid availability to control metabolism and virulence of Mycobacterium tuberculosis B Rieck, G Degiacomi, M Zimmermann, A Cascioferro, F Boldrin, ... PLoS pathogens 13 (5), e1006399, 2017 | 90 | 2017 |
Towards a mechanistic understanding of reciprocal drug–microbiome interactions M Zimmermann, KR Patil, A Typas, L Maier Molecular systems biology 17 (3), e10116, 2021 | 76 | 2021 |
Quantification and mass isotopomer profiling of α-keto acids in central carbon metabolism M Zimmermann, U Sauer, N Zamboni Analytical chemistry 86 (6), 3232-3237, 2014 | 72 | 2014 |
Modulation of bacterial metabolism by the microenvironment controls MAIT cell stimulation M Schmaler, A Colone, J Spagnuolo, M Zimmermann, M Lepore, ... Mucosal immunology 11 (4), 1060-1070, 2018 | 70 | 2018 |
The stringent response determines the ability of a commensal bacterium to survive starvation and to persist in the gut WB Schofield, M Zimmermann-Kogadeeva, M Zimmermann, NA Barry, ... Cell host & microbe 24 (1), 120-132. e6, 2018 | 65 | 2018 |