Geography, Ethnicity or Subsistence-Specific Variations in Human Microbiome Composition and Diversity VK Gupta, S Paul, C Dutta Frontiers in Microbiology 8, 1-16, 2017 | 933 | 2017 |
BPGA-an ultra-fast pan-genome analysis pipeline NM Chaudhari, VK Gupta, C Dutta Scientific reports 6 (1), 24373, 2016 | 788 | 2016 |
A predictive index for health status using species-level gut microbiome profiling VK Gupta, M Kim, U Bakshi, KY Cunningham, JM Davis III, KN Lazaridis, ... Nature communications 11 (1), 4635, 2020 | 186 | 2020 |
Divergences in gene repertoire among the reference Prevotella genomes derived from distinct body sites of human VK Gupta, NM Chaudhari, S Iskepalli, C Dutta BMC genomics 16, 1-16, 2015 | 61 | 2015 |
Gut microbial determinants of clinically important improvement in patients with rheumatoid arthritis VK Gupta, KY Cunningham, B Hur, U Bakshi, H Huang, KJ Warrington, ... Genome Medicine 13, 2021 | 56 | 2021 |
Plasma metabolomic profiling in patients with rheumatoid arthritis identifies biochemical features predictive of quantitative disease activity B Hur, VK Gupta, H Huang, KA Wright, KJ Warrington, V Taneja, ... Arthritis Research & Therapy 23 (1), 164, 2021 | 28 | 2021 |
Single-Cell Mass Cytometry on Peripheral Blood Identifies Immune Cell Subsets Associated with Primary Biliary Cholangitis JS Jang, BD Juran, KY Cunningham, VK Gupta, YM Son, JD Yang, AH Ali, ... Scientific Reports 10, 1-13, 2020 | 19 | 2020 |
PanGFR-HM: a dynamic web resource for pan-genomic and functional profiling of human microbiome with comparative features NM Chaudhari, A Gautam, VK Gupta, G Kaur, C Dutta, S Paul Frontiers in microbiology 9, 2322, 2018 | 15 | 2018 |
Stochastic Block Models Reveal a Robust Nested Pattern in Healthy Human Gut Microbiomes S Cobo-López, VK Gupta, J Sung, R Guimerá, M Sales-Pardo PNAS Nexus, 2022 | 8 | 2022 |
Patients with ACPA-positive and ACPA-negative rheumatoid arthritis show different serological autoantibody repertoires and autoantibody associations with disease activity KY Cunningham, B Hur, VK Gupta, CA Arment, KA Wright, TG Mason, ... Scientific Reports 13 (1), 1-14, 2023 | 6 | 2023 |
Evaluating the prebiotic effect of oligosaccharides on gut microbiome wellness using in vitro fecal fermentation DH Lee, H Seong, D Chang, VK Gupta, J Kim, S Cheon, G Kim, J Sung, ... npj science of food 7, 18, 2023 | 4 | 2023 |
TaxiBGC: a taxonomy-guided approach for profiling experimentally characterized microbial biosynthetic gene clusters and secondary metabolite production potential in metagenomes VK Gupta, U Bakshi, D Chang, AR Lee, JM Davis III, S Chandrasekaran, ... Msystems 7 (6), e00925-22, 2022 | 4 | 2022 |
GMWI-webtool: a user-friendly browser application for assessing health through metagenomic gut microbiome profiling D Chang, VK Gupta, B Hur, KY Cunningham, J Sung Bioinformatics 39 (2), btad061, 2023 | 2 | 2023 |
Safety, feasibility, and impact on the gut microbiome of kefir administration in critically ill adults VK Gupta, S Rajendraprasad, M Ozkan, D Ramachandran, S Ahmad, ... BMC Medicine 22, 2024 | 1 | 2024 |
Cerebrospinal fluid proteomic signatures are associated with symptom severity of first-episode psychosis H Haroon, AMC Ho, VK Gupta, S Dasari, CM Sellgren, S Cervenka, ... Journal of Psychiatric Research, 2024 | | 2024 |
New prebiotic index of foods based on gut microbiome health index (GMHI) using case studies of commercial prebiotics analyzed by in vitro fecal fermentation NS Han, DH Lee, H Seong, D Chang, V Gupta, J Kim, S Cheon, G Kim, ... | | 2022 |
Assessing Gut Health using Metagenome Data J SUNG, VK GUPTA WO Patent WO2021102293A1, 2021 | | 2021 |
Minimum Clinically Important Improvement in Patients with Rheumatoid Arthritis Associates with Gut Microbiome V Gupta, K Cunningham, B Hur, J Davis, J Sung ARTHRITIS & RHEUMATOLOGY 72, 2020 | | 2020 |
Divergences in Gene Repertoires of Microbiome Components Derived from Distinct Body-sites of Human VK Gupta CSIR-IICB and AcSIR, 2017 | | 2017 |