High contagiousness and rapid spread of severe acute respiratory syndrome coronavirus 2 S Sanche, YT Lin, C Xu, E Romero-Severson, N Hengartner, R Ke Emerging infectious diseases 26 (7), 1470, 2020 | 2089* | 2020 |
Enhancer histone acetylation modulates transcriptional bursting dynamics of neuronal activity-inducible genes LF Chen, YT Lin, DA Gallegos, MF Hazlett, M Gómez-Schiavon, MG Yang, ... Cell reports 26 (5), 1174-1188. e5, 2019 | 135 | 2019 |
Intrinsic noise in systems with switching environments PG Hufton, YT Lin, T Galla, AJ McKane Physical Review E 93 (5), 052119, 2016 | 96 | 2016 |
The United States COVID-19 forecast hub dataset EY Cramer, Y Huang, Y Wang, EL Ray, M Cornell, J Bracher, A Brennen, ... Scientific data 9 (1), 462, 2022 | 89 | 2022 |
Gene expression dynamics with stochastic bursts: Construction and exact results for a coarse-grained model YT Lin, CR Doering Physical Review E 93 (2), 022409, 2016 | 60 | 2016 |
Single cell heterogeneity in influenza A virus gene expression shapes the innate antiviral response to infection J Sun, JC Vera, J Drnevich, YT Lin, R Ke, CB Brooke PLoS pathogens 16 (7), e1008671, 2020 | 53 | 2020 |
Features of fast living: on the weak selection for longevity in degenerate birth-death processes YT Lin, H Kim, CR Doering Journal of Statistical Physics 148, 647-663, 2012 | 50 | 2012 |
Bursting noise in gene expression dynamics: linking microscopic and mesoscopic models YT Lin, T Galla Journal of The Royal Society Interface 13 (114), 20150772, 2016 | 46 | 2016 |
Pili-induced clustering of N. gonorrhoeae bacteria J Taktikos, YT Lin, H Stark, N Biais, V Zaburdaev PLoS One 10 (9), e0137661, 2015 | 44 | 2015 |
A stochastic and dynamical view of pluripotency in mouse embryonic stem cells YT Lin, PG Hufton, EJ Lee, DA Potoyan PLoS computational biology 14 (2), e1006000, 2018 | 43 | 2018 |
Efficient analysis of stochastic gene dynamics in the non-adiabatic regime using piecewise deterministic Markov processes YT Lin, NE Buchler Journal of The Royal Society Interface 15 (138), 20170804, 2018 | 38 | 2018 |
Data-Driven Learning for the Mori–Zwanzig Formalism: A Generalization of the Koopman Learning Framework YT Lin, Y Tian, D Livescu, M Anghel SIAM Journal on Applied Dynamical Systems 20 (4), 2558–2601, 2021 | 27 | 2021 |
Phenotypic switching of populations of cells in a stochastic environment PG Hufton, YT Lin, T Galla Journal of Statistical Mechanics: Theory and Experiment 2018 (2), 023501, 2018 | 27 | 2018 |
Demographic stochasticity and evolution of dispersion I. Spatially homogeneous environments YT Lin, H Kim, CR Doering Journal of mathematical biology 70, 647-678, 2015 | 27 | 2015 |
Fluctuations and stability in front propagation E Khain, YT Lin, LM Sander Europhysics Letters 93 (2), 28001, 2011 | 26 | 2011 |
Mechanisms of stochastic onset and termination of atrial fibrillation studied with a cellular automaton model YT Lin, ETY Chang, J Eatock, T Galla, RH Clayton Journal of The Royal Society Interface 14 (128), 20160968, 2017 | 24 | 2017 |
High cooperativity in negative feedback can amplify noisy gene expression P Bokes, YT Lin, A Singh Bulletin of Mathematical Biology 80, 1871-1899, 2018 | 23 | 2018 |
The novel coronavirus, 2019-nCoV, is highly contagious and more infectious than initially estimated. MedRxiv 2020 S Sanche, YT Lin, C Xu, E Romero-Severson, N Hengartner, R Ke February) Available from: https://www. medrxiv. org/content/10.1101/2020.02 …, 0 | 23 | |
Generalizing Gillespie’s direct method to enable network-free simulations R Suderman, ED Mitra, YT Lin, KE Erickson, S Feng, WS Hlavacek Bulletin of mathematical biology 81 (8), 2822-2848, 2019 | 21 | 2019 |
Prediction of optimal drug schedules for controlling autophagy A Shirin, IS Klickstein, S Feng, YT Lin, WS Hlavacek, F Sorrentino Scientific reports 9 (1), 1428, 2019 | 20 | 2019 |