| DNA-binding specificities of human transcription factors A Jolma, J Yan, T Whitington, J Toivonen, KR Nitta, P Rastas, ... Cell 152 (1), 327-339, 2013 | 1396 | 2013 |
| Lep-MAP3: robust linkage mapping even for low-coverage whole genome sequencing data P Rastas Bioinformatics 33 (23), 3726-3732, 2017 | 322 | 2017 |
| Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch J Salojärvi, OP Smolander, K Nieminen, S Rajaraman, O Safronov, ... Nature genetics 49 (6), 904-912, 2017 | 261 | 2017 |
| The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera V Ahola, R Lehtonen, P Somervuo, L Salmela, P Koskinen, P Rastas, ... Nature communications 5 (1), 4737, 2014 | 243 | 2014 |
| Complex modular architecture around a simple toolkit of wing pattern genes SM Van Belleghem, P Rastas, A Papanicolaou, SH Martin, CF Arias, ... Nature ecology & evolution 1 (3), 0052, 2017 | 207 | 2017 |
| MOODS: fast search for position weight matrix matches in DNA sequences J Korhonen, P Martinmäki, C Pizzi, P Rastas, E Ukkonen Bioinformatics 25 (23), 3181-3182, 2009 | 181 | 2009 |
| Whole-genome sequencing coupled to imputation discovers genetic signals for anthropometric traits I Tachmazidou, D Süveges, JL Min, GRS Ritchie, J Steinberg, K Walter, ... The American Journal of Human Genetics 100 (6), 865-884, 2017 | 170 | 2017 |
| Construction of Ultradense Linkage Maps with Lep-MAP2: Stickleback F 2 Recombinant Crosses as an Example P Rastas, FCF Calboli, B Guo, T Shikano, J Merilä Genome biology and evolution 8 (1), 78-93, 2016 | 140 | 2016 |
| Genome-wide SNP identification for the construction of a high-resolution genetic map of Japanese flounder (Paralichthys olivaceus): applications to QTL mapping of Vibrio … C Shao, Y Niu, P Rastas, Y Liu, Z Xie, H Li, L Wang, Y Jiang, S Tai, Y Tian, ... DNA research 22 (2), 161-170, 2015 | 132 | 2015 |
| Lep-MAP: fast and accurate linkage map construction for large SNP datasets P Rastas, L Paulin, I Hanski, R Lehtonen, P Auvinen Bioinformatics 29 (24), 3128-3134, 2013 | 131 | 2013 |
| Genetic dissection of assortative mating behavior RM Merrill, P Rastas, SH Martin, MC Melo, S Barker, J Davey, ... PLoS biology 17 (2), e2005902, 2019 | 98 | 2019 |
| Evolution at two time frames: polymorphisms from an ancient singular divergence event fuel contemporary parallel evolution SM Van Belleghem, C Vangestel, K De Wolf, Z De Corte, M Möst, ... PLoS Genetics 14 (11), e1007796, 2018 | 86 | 2018 |
| Unprecedented reorganization of holocentric chromosomes provides insights into the enigma of lepidopteran chromosome evolution J Hill, P Rastas, EA Hornett, R Neethiraj, N Clark, N Morehouse, ... Science advances 5 (6), eaau3648, 2019 | 85 | 2019 |
| High genetic load in an old isolated butterfly population ALK Mattila, A Duplouy, M Kirjokangas, R Lehtonen, P Rastas, I Hanski Proceedings of the National Academy of Sciences 109 (37), E2496-E2505, 2012 | 84 | 2012 |
| No evidence for maintenance of a sympatric Heliconius species barrier by chromosomal inversions JW Davey, SL Barker, PM Rastas, A Pinharanda, SH Martin, R Durbin, ... Evolution letters 1 (3), 138-154, 2017 | 79 | 2017 |
| A High-Quality Assembly of the Nine-Spined Stickleback (Pungitius pungitius) Genome S Varadharajan, P Rastas, A Löytynoja, M Matschiner, FCF Calboli, ... Genome Biology and Evolution 11 (11), 3291-3308, 2019 | 69 | 2019 |
| A Genome-Wide Association Study for Host Resistance to Ostreid Herpesvirus in Pacific Oysters (Crassostrea gigas) AP Gutierrez, TP Bean, C Hooper, CA Stenton, MB Sanders, RK Paley, ... G3: Genes, Genomes, Genetics 8 (4), 1273-1280, 2018 | 68 | 2018 |
| Early Sex-Chromosome Evolution in the Diploid Dioecious Plant Mercurialis annua P Veltsos, KE Ridout, MA Toups, SC González-Martínez, A Muyle, ... Genetics 212 (3), 815-835, 2019 | 53 | 2019 |
| A hidden Markov technique for haplotype reconstruction P Rastas, M Koivisto, H Mannila, E Ukkonen Algorithms in Bioinformatics: 5th International Workshop, WABI 2005 …, 2005 | 44 | 2005 |
| Flight‐induced changes in gene expression in the Glanville fritillary butterfly J Kvist, ALK Mattila, P Somervuo, V Ahola, P Koskinen, L Paulin, ... Molecular Ecology 24 (19), 4886-4900, 2015 | 42 | 2015 |
