| A systematic survey of centrality measures for protein-protein interaction networks M Ashtiani, A Salehzadeh-Yazdi, Z Razaghi-Moghadam, H Hennig, ... BMC systems biology 12, 1-17, 2018 | 178 | 2018 |
| Ranked k-medoids: A fast and accurate rank-based partitioning algorithm for clustering large datasets SMR Zadegan, M Mirzaie, F Sadoughi Knowledge-Based Systems 39, 133-143, 2013 | 109 | 2013 |
| A compartmental model that predicts the effect of social distancing and vaccination on controlling COVID-19 M Dashtbali, M Mirzaie Scientific Reports 11 (1), 8191, 2021 | 108 | 2021 |
| Updates on drug–target network; facilitating polypharmacology and data integration by growth of DrugBank database F Barneh, M Jafari, M Mirzaie Briefings in bioinformatics 17 (6), 1070-1080, 2016 | 63 | 2016 |
| CINNA: an R/CRAN package to decipher Central Informative Nodes in Network Analysis M Ashtiani, M Mirzaie, M Jafari Bioinformatics 35 (8), 1436-1437, 2019 | 59* | 2019 |
| Protein complex prediction: A survey J Zahiri, A Emamjomeh, S Bagheri, A Ivazeh, G Mahdevar, HS Tehrani, ... Genomics 112 (1), 174-183, 2020 | 55 | 2020 |
| Quantitative HPLC-based metabolomics of some Iranian saffron (Crocus sativus L.) accessions M Vahedi, M Kabiri, SA Salami, H Rezadoost, M Mirzaie, MR Kanani Industrial Crops and Products 118, 26-29, 2018 | 51 | 2018 |
| Human T‐lymphotropic virus 1 (HTLV‐1) pathogenesis: A systems virology study SH Mozhgani, M Zarei‐Ghobadi, M Teymoori‐Rad, T Mokhtari‐Azad, ... Journal of cellular biochemistry 119 (5), 3968-3979, 2018 | 37 | 2018 |
| Signaling network of lipids as a comprehensive scaffold for omics data integration in sputum of COPD patients SA Jamalkandi, M Mirzaie, M Jafari, H Mehrani, P Shariati, ... Biochimica et Biophysica Acta (BBA)-Molecular and Cell Biology of Lipids …, 2015 | 35 | 2015 |
| Rps27a might act as a controller of microglia activation in triggering neurodegenerative diseases N Khayer, M Mirzaie, SA Marashi, M Jalessi Plos one 15 (9), e0239219, 2020 | 32 | 2020 |
| A mathematical model of honey bee colony dynamics to predict the effect of pollen on colony failure S Bagheri, M Mirzaie PLoS One 14 (11), e0225632, 2019 | 26 | 2019 |
| Proteomics and traditional medicine: new aspect in explanation of temperaments M Jafari, H Rezadoost, M Karimi, M Mirzaie, M Rezaie-Tavirani, ... Forschende Komplementärmedizin/Research in Complementary Medicine 21 (4 …, 2014 | 24 | 2014 |
| An insight to HTLV-1-associated myelopathy/tropical spastic paraparesis (HAM/TSP) pathogenesis; evidence from high-throughput data integration and meta-analysis SH Mozhgani, M Piran, M Zarei-Ghobadi, M Jafari, SM Jazayeri, ... Retrovirology 16, 1-11, 2019 | 22 | 2019 |
| UNaProd: A Universal Natural Product Database for Materia Medica of Iranian Traditional Medicine A Naghizadeh, D Hamzeheian, S Akbari, F Mohammadi, T Otoufat, ... Evidence‐Based Complementary and Alternative Medicine 2020 (1), 3690781, 2020 | 19 | 2020 |
| Integrated use of bioinformatic resources reveals that co-targeting of histone deacetylases, IKBK and SRC inhibits epithelial-mesenchymal transition in cancer F Barneh, M Mirzaie, P Nickchi, TZ Tan, JP Thiery, M Piran, M Salimi, ... Briefings in bioinformatics 20 (2), 717-731, 2019 | 19 | 2019 |
| Evolutionarily conserved motifs and modules in mitochondrial protein–protein interaction networks M Jafari, M Sadeghi, M Mirzaie, SA Marashi, M Rezaei-Tavirani Mitochondrion 13 (6), 668-675, 2013 | 19 | 2013 |
| A distance‐dependent atomic knowledge‐based potential and force for discrimination of native structures from decoys M Mirzaie, C Eslahchi, H Pezeshk, M Sadeghi Proteins: Structure, Function, and Bioinformatics 77 (2), 454-463, 2009 | 19 | 2009 |
| Bipartite network models to design combination therapies in acute myeloid leukaemia M Jafari, M Mirzaie, J Bao, F Barneh, S Zheng, J Eriksson, CA Heckman, ... Nature communications 13 (1), 2128, 2022 | 18 | 2022 |
| Optimal control and differential game solutions for social distancing in response to epidemics of infectious diseases on networks MM Mohammadali Dashtbali, Alaeddin Malek Optimal Control, Applications and Methods, 2020 | 16 | 2020 |
| Three-way interaction model to trace the mechanisms involved in Alzheimer’s disease transgenic mice N Khayer, SA Marashi, M Mirzaie, F Goshadrou PloS one 12 (9), e0184697, 2017 | 16 | 2017 |
Mohieddin JafariUniversity of Helsinki在 helsinki.fi 的电子邮件经过验证
