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Yu Wan
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Alterations in chromosomal genes nfsA, nfsB, and ribE are associated with nitrofurantoin resistance in Escherichia coli from the United Kingdom
Y Wan, E Mills, RCY Leung, A Vieira, X Zhi, NJ Croucher, N Woodford, ...
Microbial Genomics 7 (12), 000702, 2021
312021
Rapid expansion and international spread of M1UK in the post-pandemic UK upsurge of Streptococcus pyogenes
A Vieira, Y Wan, Y Ryan, HK Li, RL Guy, M Papangeli, KK Huse, ...
Nature Communications 15 (1), 3916, 2024
272024
Evaluation of CD-HIT for constructing non-redundant databases
Q Chen, Y Wan, Y Lei, J Zobel, K Verspoor
2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2016
242016
GeneMates: an R package for detecting horizontal gene co-transfer between bacteria using gene-gene associations controlled for population structure
Y Wan, RR Wick, J Zobel, DJ Ingle, M Inouye, KE Holt
BMC Genomics 21 (658 (2020)), 1–14, 2020
112020
Trends in coagulase-negative staphylococci (CoNS), England, 2010–2021
K Paranthaman, A Wilson, N Verlander, G Rooney, N Macdonald, ...
Access Microbiology 5 (6), 000491. v3, 2023
102023
Comparative analysis of sequence clustering methods for deduplication of biological databases
Q Chen, Y Wan, X Zhang, Y Lei, J Zobel, K Verspoor
Journal of Data and Information Quality (JDIQ) 9 (3), 1-27, 2018
102018
The detection, survival and persistence of Staphylococcus capitis NRCS-A in neonatal units in England
DR Ginny Moore, Ailbhe Barry, Jennifer Carter, Joseph Ready, Yu Wan, Mustafa ...
Journal of Hospital Infection, 2023
72023
Building a queer- and trans-inclusive microbiology conference
mSystems 8 (5), e00433-23, 2023
62023
Draft genome sequence of a clinical isolate of Serratia marcescens, strain AH0650_Sm1
Y Wan, CL Gorrie, A Jenney, M Mirceta, KE Holt
Genome Announcements 3 (5), 10.1128/genomea. 01007-15, 2015
62015
Need for standardized vancomycin dosing for coagulase-negative staphylococci in hospitalized infants
EJ Harvey, D Ashiru-Oredope, LF Hill, A Demirjian, K Paranthaman, ...
Clinical Microbiology and Infection 29 (1), 10-12, 2023
52023
Integrated Analysis of Patient Networks and Plasmid Genomes to Investigate a Regional, Multispecies Outbreak of Carbapenemase-Producing Enterobacterales Carrying Both bla IMP …
Y Wan, AC Myall, A Boonyasiri, F Bolt, A Ledda, S Mookerjee, AY Weiße, ...
The Journal of Infectious Diseases, jiae019, 2024
4*2024
IS1-related large-scale deletion of chromosomal regions harbouring the oxygen-insensitive nitroreductase gene nfsB causes nitrofurantoin heteroresistance in Escherichia coli
Y Wan, A Sabnis, Z Mumin, I Potterill, E Jauneikaite, CS Brown, ...
Microbial Genomics 9 (9), 001102, 2023
42023
Whole-genome sequencing reveals widespread presence of Staphylococcus capitis NRCS-A clone in neonatal units across the United Kingdom
Y Wan, M Ganner, Z Mumin, D Ready, G Moore, I Potterill, K Paranthaman, ...
Journal of Infection 87 (3), 210-219, 2023
42023
Clinical outcomes of Staphylococcus capitis isolation from neonates, England, 2015–2021: a retrospective case–control study
JM Yuan, C Nugent, A Wilson, NQ Verlander, E Alexander, P Fleming, ...
Archives of Disease in Childhood-Fetal and Neonatal Edition 109 (2), 128-134, 2024
32024
Queer-and trans-inclusive faculty hiring—A call for change
JL Weissman, CR Chappell, B Francesco Rodrigues de Oliveira, N Evans, ...
PLoS biology 22 (11), e3002919, 2024
2*2024
Soft Tissue Infection of Immunocompetent Man with Cat-Derived Globicatella Species
TG Nick K. Jones, Juliana Coelho, Julie M.J. Logan, Karen Broughton, Katie L ...
Emerging Infectious Diseases 29 (8), 1684–1687, 2023
22023
Sequence Clustering Methods and Completeness of Biological Database Search.
Q Chen, X Zhang, Y Wan, J Zobel, K Verspoor
BAI@ IJCAI, 8-14, 2017
22017
Reconstructing and predicting the spatial evolution of carbapenemase-producing Enterobacteriaceae outbreaks
A Myall, M Wiedermann, P Vasikasin, P Klamser, Y Wan, A Zachariae, ...
International Journal of Infectious Diseases 130, S65, 2023
1*2023
Search Effectiveness in Nonredundant Sequence Databases: Assessments and Solutions
Q Chen, X Zhang, Y Wan, J Zobel, K Verspoor
Journal of Computational Biology 26 (6), 605-617, 2019
12019
Rasti: Iterative assembly-based search for target nucleotides
Y Wan
2024
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