Assessment of network module identification across complex diseases S Choobdar, ME Ahsen, J Crawford, M Tomasoni, T Fang, D Lamparter, ... Nature methods 16 (9), 843-852, 2019 | 252 | 2019 |
CancerSubtypes: an R/Bioconductor package for molecular cancer subtype identification, validation, and visualization T Xu, T Duy Le, L Liu, N Su, R Wang, B Sun, A Colaprico, G Bontempi, J Li Bioinformatics 33 (19), 3131–3133, 2017 | 200 | 2017 |
Identifying cancer subtypes from miRNA-TF-mRNA regulatory networks and expression data T Xu, TD Le, L Liu, R Wang, B Sun, J Li PloS one 11 (4), e0152792, 2016 | 85 | 2016 |
miRBaseConverter: an R/Bioconductor package for converting and retrieving miRNA name, accession, sequence and family information in different versions of miRBase T Xu, N Su, L Liu, J Zhang, H Wang, W Zhang, J Gui, K Yu, J Li, TD Le BMC bioinformatics 19, 179-188, 2018 | 66 | 2018 |
Variable rate fertilization system with adjustable active feed-roll length N Su, T Xu, L Song, R Wang, Y Wei International Journal of Agricultural and Biological Engineering 8 (4), 19, 2015 | 57 | 2015 |
miRspongeR: an R/Bioconductor package for the identification and analysis of miRNA sponge interaction networks and modules J Zhang, L Liu, T Xu, Y Xie, C Zhao, J Li, TD Le BMC bioinformatics 20, 1-12, 2019 | 35 | 2019 |
Large expert-curated database for benchmarking document similarity detection in biomedical literature search P Brown, Y Zhou Database 2019, baz085, 2019 | 34 | 2019 |
Open community challenge reveals molecular network modules with key roles in diseases S Choobdar, M Ahsen, J Crawford, M Tomasoni, D Lamparter, J Lin, ... | 28 | 2018 |
A novel single-cell based method for breast cancer prognosis X Li, L Liu, GJ Goodall, A Schreiber, T Xu, J Li, TD Le PLoS computational biology 16 (8), e1008133, 2020 | 24 | 2020 |
Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction VVH Pham, J Zhang, L Liu, B Truong, T Xu, TT Nguyen, J Li, TD Le BMC bioinformatics 20, 1-12, 2019 | 22 | 2019 |
LMSM: A modular approach for identifying lncRNA related miRNA sponge modules in breast cancer J Zhang, T Xu, L Liu, W Zhang, C Zhao, S Li, J Li, N Rao, TD Le PLoS Computational Biology 16 (4), e1007851, 2020 | 18 | 2020 |
Identifying miRNA synergism using multiple-intervention causal inference J Zhang, VVH Pham, L Liu, T Xu, B Truong, J Li, N Rao, TD Le BMC bioinformatics 20, 1-11, 2019 | 18 | 2019 |
ParallelPC: an R package for efficient causal exploration in genomic data TD Le, T Xu, L Liu, H Shu, T Hoang, J Li Trends and Applications in Knowledge Discovery and Data Mining: PAKDD 2018 …, 2018 | 15 | 2018 |
Time to infer miRNA sponge modules J Zhang, L Liu, T Xu, W Zhang, J Li, N Rao, TD Le Wiley Interdisciplinary Reviews: RNA 13 (2), e1686, 2022 | 13 | 2022 |
Exploring cell-specific miRNA regulation with single-cell miRNA-mRNA co-sequencing data J Zhang, L Liu, T Xu, W Zhang, C Zhao, S Li, J Li, N Rao, TD Le BMC bioinformatics 22, 1-19, 2021 | 13 | 2021 |
Structured Sparse Non-Negative Matrix Factorization With -Norm W Min, T Xu, X Wan, TH Chang IEEE Transactions on Knowledge and Data Engineering 35 (8), 8584-8595, 2022 | 11* | 2022 |
A novel variable rate fertilization system based on the Android platform T Xu, N Su, R Wang, L Song 2015 IEEE International Conference on Progress in Informatics and Computing …, 2015 | 9 | 2015 |
Uncovering the roles of microRNAs/lncRNAs in characterising breast cancer subtypes and prognosis X Li, B Truong, T Xu, L Liu, J Li, TD Le BMC bioinformatics 22, 1-22, 2021 | 7 | 2021 |
Reflectance spectroscopy with multivariate methods for non-destructive discrimination of edible oil adulteration N Su, S Weng, L Wang, T Xu Biosensors 11 (12), 492, 2021 | 6 | 2021 |
miRSM: an R package to infer and analyse miRNA sponge modules in heterogeneous data J Zhang, L Liu, T Xu, W Zhang, C Zhao, S Li, J Li, N Rao, TD Le RNA biology 18 (12), 2308-2320, 2021 | 6 | 2021 |