H3N2 mismatch of 2014–15 northern hemisphere influenza vaccines and head-to-head comparison between human and ferret antisera derived antigenic maps H Xie, XF Wan, Z Ye, EP Plant, Y Zhao, Y Xu, X Li, C Finch, N Zhao, ... Scientific reports 5 (1), 1-10, 2015 | 155 | 2015 |
Metagenomic nanopore sequencing of influenza virus direct from clinical respiratory samples K Lewandowski, Y Xu, ST Pullan, SF Lumley, D Foster, N Sanderson, ... Journal of clinical microbiology 58 (1), e00963-19, 2019 | 152 | 2019 |
Unveiling the origin and transmission of 2019-nCoV Y Xu Trends in microbiology 28 (4), 239-240, 2020 | 79 | 2020 |
Detection of viral pathogens with multiplex Nanopore MinION sequencing: be careful with cross-talk Y Xu, K Lewandowski, S Lumley, S Pullan, R Vipond, M Carroll, D Foster, ... Frontiers in microbiology 9, 2225, 2018 | 77 | 2018 |
Influenza A subtype H3 viruses in feral swine, United States, 2011–2012 Z Feng, JA Baroch, LP Long, Y Xu, FL Cunningham, K Pedersen, ... Emerging infectious diseases 20 (5), 843, 2014 | 39 | 2014 |
Low-pathogenic influenza A viruses in North American diving ducks contribute to the emergence of a novel highly pathogenic influenza A (H7N8) virus Y Xu, AM Ramey, AS Bowman, TJ DeLiberto, ML Killian, S Krauss, ... Journal of virology 91 (9), e02208-16, 2017 | 34 | 2017 |
Nanopore metagenomic sequencing to investigate nosocomial transmission of human metapneumovirus from a unique genetic group among haematology patients in the United Kingdom Y Xu, K Lewandowski, K Jeffery, LO Downs, D Foster, ND Sanderson, ... Journal of Infection 80 (5), 571-577, 2020 | 28 | 2020 |
Quartet-based methods to reconstruct phylogenetic networks J Yang, S Grünewald, Y Xu, XF Wan BMC systems biology 8 (1), 1-12, 2014 | 28 | 2014 |
Nanopore metagenomic sequencing of influenza virus directly from respiratory samples: diagnosis, drug resistance and nosocomial transmission, United Kingdom, 2018/19 influenza … Y Xu, K Lewandowski, LO Downs, J Kavanagh, T Hender, S Lumley, ... Eurosurveillance 26 (27), 2000004, 2021 | 26 | 2021 |
Limited antigenic diversity in contemporary H7 avian-origin influenza A viruses from North America Y Xu, E Bailey, E Spackman, T Li, H Wang, LP Long, JA Baroch, ... Scientific reports 6 (1), 1-17, 2016 | 26 | 2016 |
Identification of the source of A (H10N8) virus causing human infection Y Xu, H Cao, H Liu, H Sun, B Martin, Y Zhao, Q Wang, G Deng, J Xue, ... Infection, Genetics and Evolution 30, 159-163, 2015 | 26 | 2015 |
Antigenic and genetic evolution of low-pathogenicity avian influenza viruses of subtype H7N3 following heterologous vaccination MS Beato, Y Xu, LP Long, I Capua, XF Wan Clinical and Vaccine Immunology 21 (5), 603-612, 2014 | 26 | 2014 |
Zoonotic risk, pathogenesis, and transmission of avian-origin H3N2 canine influenza virus H Sun, S Blackmon, G Yang, K Waters, T Li, R Tangwangvivat, Y Xu, ... Journal of virology 91 (21), e00637-17, 2017 | 25 | 2017 |
DNA Thermo-Protection Facilitates Whole Genome Sequencing of Mycobacteria Direct from Clinical Samples S George, Y Xu, G Rodger, M Morgan, ND Sanderson, SJ Hoosdally, ... Journal of clinical microbiology, JCM. 00670-20, 2020 | 24 | 2020 |
Mutation from arginine to lysine at the position 189 of hemagglutinin contributes to the antigenic drift in H3N2 swine influenza viruses J Ye, Y Xu, J Harris, H Sun, AS Bowman, F Cunningham, C Cardona, ... Virology 446 (1-2), 225-229, 2013 | 23 | 2013 |
Dynamics of virus shedding and antibody responses in influenza A virus-infected feral swine H Sun, FL Cunningham, J Harris, Y Xu, LP Long, K Hanson-Dorr, ... The Journal of general virology 96 (Pt 9), 2569, 2015 | 20 | 2015 |
NanoSPC: a scalable, portable, cloud compatible viral nanopore metagenomic data processing pipeline Y Xu, F Yang-Turner, D Volk, D Crook Nucleic acids research 48 (W1), W366-W371, 2020 | 17 | 2020 |
Genetic diversity and potential recombination between ferret coronaviruses from European and American lineages Y Xu Journal of Infection 80 (3), 350-371, 2020 | 17 | 2020 |
Error-prone pcr-based mutagenesis strategy for rapidly generating high-yield influenza vaccine candidates J Ye, F Wen, Y Xu, N Zhao, L Long, H Sun, J Yang, J Cooley, GT Pharr, ... Virology 482, 234-243, 2015 | 15 | 2015 |
Potency, efficacy, and antigenic mapping of H7 avian influenza virus vaccines against the 2012 H7N3 highly pathogenic avian influenza virus from Mexico E Spackman, XF Wan, D Kapczynski, Y Xu, M Pantin-Jackwood, ... Avian diseases 58 (3), 359-366, 2014 | 15 | 2014 |