| Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events VK Wong, S Baker, DJ Pickard, J Parkhill, AJ Page, NA Feasey, ... Nature genetics 47 (6), 632-639, 2015 | 478 | 2015 |
| Salmonella chronic carriage: epidemiology, diagnosis, and gallbladder persistence JS Gunn, JM Marshall, S Baker, S Dongol, RC Charles, ET Ryan Trends in microbiology 22 (11), 648-655, 2014 | 349 | 2014 |
| Phase 3 efficacy analysis of a typhoid conjugate vaccine trial in Nepal M Shakya, R Colin-Jones, K Theiss-Nyland, M Voysey, D Pant, N Smith, ... New England Journal of Medicine 381 (23), 2209-2218, 2019 | 163 | 2019 |
| An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid VK Wong, S Baker, TR Connor, D Pickard, AJ Page, J Dave, N Murphy, ... Nature communications 7 (1), 12827, 2016 | 148 | 2016 |
| Combined high-resolution genotyping and geospatial analysis reveals modes of endemic urban typhoid fever transmission S Baker, KE Holt, ACA Clements, A Karkey, A Arjyal, MF Boni, S Dongol, ... Open biology 1 (2), 110008, 2011 | 147 | 2011 |
| The sensitivity of real-time PCR amplification targeting invasive Salmonellaserovars in biological specimens TVT Nga, A Karkey, S Dongol, HN Thuy, S Dunstan, K Holt, LTP Tu, ... BMC Infectious Diseases 10, 1-9, 2010 | 142 | 2010 |
| A novel ciprofloxacin-resistant subclade of H58 Salmonella Typhi is associated with fluoroquinolone treatment failure D Pham Thanh, A Karkey, S Dongol, N Ho Thi, CN Thompson, MA Rabaa, ... Elife 5, e14003, 2016 | 127 | 2016 |
| The burden and characteristics of enteric fever at a healthcare facility in a densely populated area of Kathmandu A Karkey, A Arjyal, KL Anders, MF Boni, S Dongol, S Koirala, PVT My, ... PloS one 5 (11), e13988, 2010 | 109 | 2010 |
| The Ecological Dynamics of Fecal Contamination and Salmonella Typhi and Salmonella Paratyphi A in Municipal Kathmandu Drinking Water A Karkey, T Jombart, AW Walker, CN Thompson, A Torres, S Dongol, ... PLoS neglected tropical diseases 10 (1), e0004346, 2016 | 107 | 2016 |
| Variation at HLA-DRB1 is associated with resistance to enteric fever SJ Dunstan, NT Hue, B Han, Z Li, TTB Tram, KS Sim, CM Parry, NT Chinh, ... Nature genetics 46 (12), 1333-1336, 2014 | 107 | 2014 |
| A high‐resolution genomic analysis of multidrug‐resistant hospital outbreaks of Klebsiella pneumoniae H Chung The, A Karkey, D Pham Thanh, CJ Boinett, AK Cain, M Ellington, ... EMBO molecular medicine 7 (3), 227-239, 2015 | 100 | 2015 |
| Differential Epidemiology of Salmonella Typhi and Paratyphi A in Kathmandu, Nepal: A Matched Case Control Investigation in a Highly Endemic Enteric Fever Setting A Karkey, CN Thompson, N Tran Vu Thieu, S Dongol, T Le Thi Phuong, ... PLoS neglected tropical diseases 7 (8), e2391, 2013 | 91 | 2013 |
| Undifferentiated febrile illness in Kathmandu, Nepal CN Thompson, SD Blacksell, DH Paris, A Arjyal, A Karkey, S Dongol, ... The American journal of tropical medicine and hygiene 92 (4), 875, 2015 | 88 | 2015 |
| High-throughput bacterial SNP typing identifies distinct clusters of SalmonellaTyphi causing typhoid in Nepalese children KE Holt, S Baker, S Dongol, B Basnyat, N Adhikari, S Thorson, ... BMC Infectious Diseases 10, 1-9, 2010 | 84 | 2010 |
| The Microbiological and Clinical Characteristics of Invasive Salmonella in Gallbladders from Cholecystectomy Patients in Kathmandu, Nepal S Dongol, CN Thompson, S Clare, TVT Nga, PT Duy, A Karkey, A Arjyal, ... Public Library of Science 7 (10), e47342, 2012 | 82 | 2012 |
| Hepatitis E virus seroprevalence in three hyperendemic areas: Nepal, Bangladesh and southwest France J Izopet, AB Labrique, B Basnyat, HR Dalton, B Kmush, CD Heaney, ... Journal of clinical virology 70, 39-42, 2015 | 76 | 2015 |
| Gatifloxacin versus ceftriaxone for uncomplicated enteric fever in Nepal: an open-label, two-centre, randomised controlled trial A Arjyal, B Basnyat, HT Nhan, S Koirala, A Giri, N Joshi, M Shakya, ... The Lancet infectious diseases 16 (5), 535-545, 2016 | 75 | 2016 |
| Gatifloxacin versus chloramphenicol for uncomplicated enteric fever: an open-label, randomised, controlled trial A Arjyal, B Basnyat, S Koirala, A Karkey, S Dongol, KK Agrawaal, ... The Lancet infectious diseases 11 (6), 445-454, 2011 | 75 | 2011 |
| Suitable Disk Antimicrobial Susceptibility Breakpoints Defining Salmonella enterica Serovar Typhi Isolates with Reduced Susceptibility to Fluoroquinolones CM Parry, CT Thuy, S Dongol, A Karkey, H Vinh, NT Chinh, PT Duy, ... Antimicrobial agents and chemotherapy 54 (12), 5201-5208, 2010 | 72 | 2010 |
| Burden of enteric fever at three urban sites in Africa and Asia: a multicentre population-based study JE Meiring, M Shakya, F Khanam, M Voysey, MT Phillips, S Tonks, ... The Lancet Global Health 9 (12), e1688-e1696, 2021 | 70 | 2021 |
